Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC006277.1-201ENST00000624348 1610 ntBASIC15.14■□□□□ 0.01
CDH11P55287 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH11P55287 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDH11P55287 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CDH11P55287 POLD2P1-201ENST00000511220 997 ntBASIC15.14■□□□□ 0.01
CDH11P55287 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH11P55287 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH11P55287 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH11P55287 TERC-201ENST00000602385 541 ntBASIC15.14■□□□□ 0.01
CDH11P55287 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 AC013467.2-201ENST00000605472 835 ntBASIC15.14■□□□□ 0.01
CDH11P55287 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.14■□□□□ 0.01
CDH11P55287 MIR1199-201ENST00000621445 119 ntBASIC15.14■□□□□ 0.01
CDH11P55287 AC103702.1-201ENST00000548801 2630 ntBASIC15.14■□□□□ 0.01
CDH11P55287 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 AC097637.2-201ENST00000624096 1997 ntBASIC15.14■□□□□ 0.01
CDH11P55287 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.14■□□□□ 0.01
CDH11P55287 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDH11P55287 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.14■□□□□ 0.01
CDH11P55287 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
CDH11P55287 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDH11P55287 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH11P55287 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH11P55287 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH11P55287 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.13■□□□□ 0.01
CDH11P55287 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 AC006557.2-201ENST00000592985 1240 ntBASIC15.13■□□□□ 0.01
CDH11P55287 SIGLEC16-201ENST00000599858 1437 ntBASIC15.13■□□□□ 0.01
CDH11P55287 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 GPALPP1-207ENST00000611650 899 ntBASIC15.13■□□□□ 0.01
CDH11P55287 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH11P55287 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH11P55287 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDH11P55287 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.13■□□□□ 0.01
CDH11P55287 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDH11P55287 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDH11P55287 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.13■□□□□ 0.01
CDH11P55287 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 GGT3P-204ENST00000453783 1664 ntBASIC15.12■□□□□ 0.01
CDH11P55287 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CDH11P55287 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CDH11P55287 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDH11P55287 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms