Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 AC024267.1-201ENST00000582320 895 ntBASIC17.94■□□□□ 0.46
NCKAP1LP55160 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 MIR4321-201ENST00000592276 80 ntBASIC17.94■□□□□ 0.46
NCKAP1LP55160 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 LINC00628-201ENST00000628516 1289 ntBASIC17.94■□□□□ 0.46
NCKAP1LP55160 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.94■□□□□ 0.46
NCKAP1LP55160 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCKAP1LP55160 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 CYP2T1P-202ENST00000641596 2535 ntBASIC17.93■□□□□ 0.46
NCKAP1LP55160 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 AC092183.1-201ENST00000469884 875 ntBASIC17.93■□□□□ 0.46
NCKAP1LP55160 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 RNA5SP410-201ENST00000516285 106 ntBASIC17.93■□□□□ 0.46
NCKAP1LP55160 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.93■□□□□ 0.46
NCKAP1LP55160 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCKAP1LP55160 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.92■□□□□ 0.46
NCKAP1LP55160 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NCKAP1LP55160 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms