Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ATN1P54259 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.03■□□□□ 0.48
ATN1P54259 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.03■□□□□ 0.48
ATN1P54259 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC18.03■□□□□ 0.48
ATN1P54259 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.03■□□□□ 0.48
ATN1P54259 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC18.03■□□□□ 0.48
ATN1P54259 SLC25A47P1-201ENST00000531577 414 ntBASIC18.03■□□□□ 0.48
ATN1P54259 AC092337.1-201ENST00000568699 1129 ntBASIC18.03■□□□□ 0.48
ATN1P54259 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.03■□□□□ 0.48
ATN1P54259 AC233724.13-201ENST00000598383 410 ntBASIC18.03■□□□□ 0.48
ATN1P54259 AC006213.5-201ENST00000619673 288 ntBASIC18.03■□□□□ 0.48
ATN1P54259 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC18.03■□□□□ 0.48
ATN1P54259 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 KRT8P39-201ENST00000396270 1433 ntBASIC18.03■□□□□ 0.48
ATN1P54259 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATN1P54259 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.03■□□□□ 0.48
ATN1P54259 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ATN1P54259 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.03■□□□□ 0.48
ATN1P54259 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.03■□□□□ 0.48
ATN1P54259 AC020907.1-201ENST00000616460 1350 ntBASIC18.03■□□□□ 0.48
ATN1P54259 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.03■□□□□ 0.48
ATN1P54259 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC18.02■□□□□ 0.48
ATN1P54259 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.02■□□□□ 0.48
ATN1P54259 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 AC004945.1-201ENST00000416738 983 ntBASIC18.02■□□□□ 0.48
ATN1P54259 AC099336.1-201ENST00000417053 1171 ntBASIC18.02■□□□□ 0.48
ATN1P54259 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATN1P54259 AC093724.1-201ENST00000448659 1027 ntBASIC18.02■□□□□ 0.48
ATN1P54259 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.02■□□□□ 0.48
ATN1P54259 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ATN1P54259 AC099548.2-209ENST00000480264 625 ntBASIC18.02■□□□□ 0.48
ATN1P54259 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.02■□□□□ 0.48
ATN1P54259 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.02■□□□□ 0.48
ATN1P54259 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.02■□□□□ 0.48
ATN1P54259 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.02■□□□□ 0.48
ATN1P54259 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.02■□□□□ 0.48
ATN1P54259 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATN1P54259 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
ATN1P54259 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
ATN1P54259 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATN1P54259 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.01■□□□□ 0.47
ATN1P54259 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ATN1P54259 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.01■□□□□ 0.47
ATN1P54259 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.01■□□□□ 0.47
ATN1P54259 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.01■□□□□ 0.47
ATN1P54259 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.01■□□□□ 0.47
ATN1P54259 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.01■□□□□ 0.47
ATN1P54259 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.01■□□□□ 0.47
ATN1P54259 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.01■□□□□ 0.47
ATN1P54259 AC144521.1-201ENST00000607148 956 ntBASIC18.01■□□□□ 0.47
ATN1P54259 AC021321.1-201ENST00000607397 1113 ntBASIC18.01■□□□□ 0.47
ATN1P54259 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.01■□□□□ 0.47
ATN1P54259 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ATN1P54259 SNX33P1-201ENST00000592116 1762 ntBASIC18.01■□□□□ 0.47
ATN1P54259 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATN1P54259 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATN1P54259 TUBB8P12-201ENST00000308911 1335 ntBASIC18■□□□□ 0.47
ATN1P54259 TUBB7P-202ENST00000428444 1305 ntBASIC18■□□□□ 0.47
ATN1P54259 TUBB8P7-204ENST00000567960 1332 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms