Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
PDX1P52945 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.96■□□□□ 0.15
PDX1P52945 AL590560.3-201ENST00000623350 461 ntBASIC15.96■□□□□ 0.15
PDX1P52945 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PDX1P52945 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDX1P52945 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PDX1P52945 AP3S2-216ENST00000617003 1561 ntBASIC15.96■□□□□ 0.14
PDX1P52945 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDX1P52945 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PDX1P52945 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.95■□□□□ 0.14
PDX1P52945 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.95■□□□□ 0.14
PDX1P52945 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.95■□□□□ 0.14
PDX1P52945 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.95■□□□□ 0.14
PDX1P52945 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 AC027369.6-201ENST00000525520 931 ntBASIC15.95■□□□□ 0.14
PDX1P52945 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.95■□□□□ 0.14
PDX1P52945 AC021097.1-201ENST00000607902 574 ntBASIC15.95■□□□□ 0.14
PDX1P52945 AC007967.4-201ENST00000614700 386 ntBASIC15.95■□□□□ 0.14
PDX1P52945 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PDX1P52945 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.95■□□□□ 0.14
PDX1P52945 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
PDX1P52945 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.95■□□□□ 0.14
PDX1P52945 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.95■□□□□ 0.14
PDX1P52945 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PDX1P52945 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.94■□□□□ 0.14
PDX1P52945 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.94■□□□□ 0.14
PDX1P52945 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 SPDYE22P-201ENST00000582158 798 ntBASIC15.94■□□□□ 0.14
PDX1P52945 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 AL138828.2-201ENST00000615812 383 ntBASIC15.94■□□□□ 0.14
PDX1P52945 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.94■□□□□ 0.14
PDX1P52945 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PDX1P52945 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.94■□□□□ 0.14
PDX1P52945 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PDX1P52945 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms