Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCN3P51790 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 AL844908.2-201ENST00000609461 460 ntBASIC17.99■□□□□ 0.47
CLCN3P51790 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLCN3P51790 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
CLCN3P51790 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN3P51790 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCN3P51790 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLCN3P51790 AC005052.1-201ENST00000625181 2492 ntBASIC17.98■□□□□ 0.47
CLCN3P51790 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CLCN3P51790 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCN3P51790 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCN3P51790 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CLCN3P51790 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLCN3P51790 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CLCN3P51790 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCN3P51790 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCN3P51790 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN3P51790 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN3P51790 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN3P51790 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLCN3P51790 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN3P51790 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN3P51790 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN3P51790 AC009477.1-201ENST00000452936 217 ntBASIC17.97■□□□□ 0.47
CLCN3P51790 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.97■□□□□ 0.47
CLCN3P51790 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN3P51790 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
CLCN3P51790 AC009407.1-201ENST00000568958 598 ntBASIC17.97■□□□□ 0.47
CLCN3P51790 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCN3P51790 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN3P51790 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN3P51790 AC087499.5-201ENST00000452760 1342 ntBASIC17.97■□□□□ 0.47
CLCN3P51790 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN3P51790 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN3P51790 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN3P51790 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.96■□□□□ 0.47
CLCN3P51790 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN3P51790 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.96■□□□□ 0.47
CLCN3P51790 AC008738.7-201ENST00000609744 511 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms