Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CPT1AP50416 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CPT1AP50416 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.07■□□□□ 0.48
CPT1AP50416 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CPT1AP50416 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.07■□□□□ 0.48
CPT1AP50416 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
CPT1AP50416 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.07■□□□□ 0.48
CPT1AP50416 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CPT1AP50416 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.07■□□□□ 0.48
CPT1AP50416 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.07■□□□□ 0.48
CPT1AP50416 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.07■□□□□ 0.48
CPT1AP50416 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPT1AP50416 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CPT1AP50416 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.06■□□□□ 0.48
CPT1AP50416 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 HLA-V-201ENST00000429037 534 ntBASIC18.06■□□□□ 0.48
CPT1AP50416 AL589987.1-201ENST00000453380 819 ntBASIC18.06■□□□□ 0.48
CPT1AP50416 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 ELK1P1-201ENST00000485699 580 ntBASIC18.06■□□□□ 0.48
CPT1AP50416 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CPT1AP50416 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.06■□□□□ 0.48
CPT1AP50416 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.06■□□□□ 0.48
CPT1AP50416 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPT1AP50416 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.06■□□□□ 0.48
CPT1AP50416 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.06■□□□□ 0.48
CPT1AP50416 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 AC139713.2-201ENST00000641328 2723 ntBASIC18.06■□□□□ 0.48
CPT1AP50416 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CPT1AP50416 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPT1AP50416 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 CYP4F24P-201ENST00000586049 1580 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.05■□□□□ 0.48
CPT1AP50416 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.05■□□□□ 0.48
CPT1AP50416 TTTY23B-201ENST00000442790 549 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.05■□□□□ 0.48
CPT1AP50416 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.05■□□□□ 0.48
CPT1AP50416 ACA64.2-201ENST00000459014 129 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 RN7SL837P-201ENST00000463010 287 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.05■□□□□ 0.48
CPT1AP50416 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.05■□□□□ 0.48
CPT1AP50416 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.05■□□□□ 0.48
CPT1AP50416 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms