Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CASP4P49662 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 AC024909.3-201ENST00000611513 2257 ntBASIC17.91■□□□□ 0.46
CASP4P49662 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CASP4P49662 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.91■□□□□ 0.46
CASP4P49662 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CASP4P49662 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 AL671277.1-201ENST00000429656 993 ntBASIC17.9■□□□□ 0.46
CASP4P49662 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.9■□□□□ 0.46
CASP4P49662 AC112482.1-201ENST00000492080 688 ntBASIC17.9■□□□□ 0.46
CASP4P49662 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.9■□□□□ 0.46
CASP4P49662 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
CASP4P49662 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
CASP4P49662 AC010491.1-201ENST00000563101 2797 ntBASIC17.9■□□□□ 0.46
CASP4P49662 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CASP4P49662 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.89■□□□□ 0.46
CASP4P49662 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.89■□□□□ 0.46
CASP4P49662 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.89■□□□□ 0.46
CASP4P49662 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CASP4P49662 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CASP4P49662 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CASP4P49662 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.89■□□□□ 0.45
CASP4P49662 GPX1P2-201ENST00000429271 606 ntBASIC17.89■□□□□ 0.45
CASP4P49662 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.89■□□□□ 0.45
CASP4P49662 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.89■□□□□ 0.45
CASP4P49662 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.89■□□□□ 0.45
CASP4P49662 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.89■□□□□ 0.45
CASP4P49662 AC092865.5-201ENST00000545435 363 ntBASIC17.89■□□□□ 0.45
CASP4P49662 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 AL135744.1-201ENST00000565098 629 ntBASIC17.89■□□□□ 0.45
CASP4P49662 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CASP4P49662 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.89■□□□□ 0.45
CASP4P49662 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.89■□□□□ 0.45
CASP4P49662 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CASP4P49662 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CASP4P49662 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.89■□□□□ 0.45
CASP4P49662 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CASP4P49662 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CASP4P49662 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms