Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.99□□□□□ -0.01
CENPAP49450 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.99□□□□□ -0.01
CENPAP49450 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.99□□□□□ -0.01
CENPAP49450 TSPY19P-201ENST00000418461 509 ntBASIC14.99□□□□□ -0.01
CENPAP49450 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 TSPY18P-201ENST00000441642 509 ntBASIC14.99□□□□□ -0.01
CENPAP49450 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 FGFR3P6-201ENST00000457012 610 ntBASIC14.99□□□□□ -0.01
CENPAP49450 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.99□□□□□ -0.01
CENPAP49450 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 AC012313.10-201ENST00000623509 926 ntBASIC14.99□□□□□ -0.01
CENPAP49450 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.99□□□□□ -0.01
CENPAP49450 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.99□□□□□ -0.01
CENPAP49450 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.99□□□□□ -0.01
CENPAP49450 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CENPAP49450 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CENPAP49450 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CENPAP49450 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 MTHFR-217ENST00000641820 1569 ntBASIC14.98□□□□□ -0.01
CENPAP49450 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 ME2P1-201ENST00000426028 1970 ntBASIC14.98□□□□□ -0.01
CENPAP49450 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 PTCHD3P3-201ENST00000403073 906 ntBASIC14.98□□□□□ -0.01
CENPAP49450 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.98□□□□□ -0.01
CENPAP49450 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.98□□□□□ -0.01
CENPAP49450 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.98□□□□□ -0.01
CENPAP49450 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CENPAP49450 AC002310.6-201ENST00000624451 1377 ntBASIC14.98□□□□□ -0.01
CENPAP49450 AC005052.1-201ENST00000625181 2492 ntBASIC14.98□□□□□ -0.01
CENPAP49450 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CENPAP49450 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CENPAP49450 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CENPAP49450 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CENPAP49450 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CENPAP49450 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CENPAP49450 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms