Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR4A2P43354 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.04■□□□□ -0
NR4A2P43354 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.04■□□□□ -0
NR4A2P43354 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 AC023908.3-201ENST00000564211 3047 ntBASIC15.03■□□□□ -0
NR4A2P43354 RPS2P28-201ENST00000314255 741 ntBASIC15.03■□□□□ -0
NR4A2P43354 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 MIR574-201ENST00000385209 96 ntBASIC15.03■□□□□ -0
NR4A2P43354 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.03■□□□□ -0
NR4A2P43354 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.03■□□□□ -0
NR4A2P43354 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.03■□□□□ -0
NR4A2P43354 AP001269.4-201ENST00000609611 512 ntBASIC15.03■□□□□ -0
NR4A2P43354 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 FLJ16779-201ENST00000612722 7638 ntBASIC15.03■□□□□ -0
NR4A2P43354 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.03■□□□□ -0
NR4A2P43354 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NR4A2P43354 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.03■□□□□ -0
NR4A2P43354 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 AC026748.1-201ENST00000624349 3251 ntBASIC15.02■□□□□ -0
NR4A2P43354 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.02■□□□□ -0
NR4A2P43354 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 SLC25A1P1-201ENST00000528351 927 ntBASIC15.02■□□□□ -0
NR4A2P43354 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.02■□□□□ -0
NR4A2P43354 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.02■□□□□ -0
NR4A2P43354 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.02■□□□□ -0
NR4A2P43354 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
NR4A2P43354 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 AC013268.4-201ENST00000637413 2228 ntBASIC15.02□□□□□ -0.01
NR4A2P43354 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A2P43354 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A2P43354 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.02□□□□□ -0.01
NR4A2P43354 AC006058.4-201ENST00000624016 1670 ntBASIC15.02□□□□□ -0.01
NR4A2P43354 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A2P43354 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.02□□□□□ -0.01
NR4A2P43354 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NR4A2P43354 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.02□□□□□ -0.01
NR4A2P43354 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms