Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RFC5P40937 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.1■□□□□ 0.49
RFC5P40937 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFC5P40937 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.1■□□□□ 0.49
RFC5P40937 AC069120.2-201ENST00000524091 540 ntBASIC18.1■□□□□ 0.49
RFC5P40937 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.1■□□□□ 0.49
RFC5P40937 AC061975.2-201ENST00000581722 295 ntBASIC18.1■□□□□ 0.49
RFC5P40937 AL158211.3-201ENST00000607385 239 ntBASIC18.1■□□□□ 0.49
RFC5P40937 AC244517.3-201ENST00000616254 1235 ntBASIC18.1■□□□□ 0.49
RFC5P40937 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.1■□□□□ 0.49
RFC5P40937 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFC5P40937 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.09■□□□□ 0.49
RFC5P40937 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFC5P40937 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 AC055876.3-201ENST00000431496 288 ntBASIC18.09■□□□□ 0.49
RFC5P40937 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC5P40937 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.09■□□□□ 0.49
RFC5P40937 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC5P40937 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.09■□□□□ 0.49
RFC5P40937 AC005498.2-205ENST00000593218 784 ntBASIC18.09■□□□□ 0.49
RFC5P40937 AL365330.1-201ENST00000607459 531 ntBASIC18.09■□□□□ 0.49
RFC5P40937 AC138649.4-201ENST00000612222 287 ntBASIC18.09■□□□□ 0.49
RFC5P40937 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
RFC5P40937 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.09■□□□□ 0.49
RFC5P40937 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFC5P40937 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.09■□□□□ 0.49
RFC5P40937 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
RFC5P40937 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC5P40937 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC5P40937 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC5P40937 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RFC5P40937 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFC5P40937 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RFC5P40937 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.08■□□□□ 0.49
RFC5P40937 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFC5P40937 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RFC5P40937 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC5P40937 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC5P40937 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC5P40937 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.08■□□□□ 0.48
RFC5P40937 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.08■□□□□ 0.48
RFC5P40937 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.08■□□□□ 0.48
RFC5P40937 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RFC5P40937 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFC5P40937 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.07■□□□□ 0.48
RFC5P40937 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFC5P40937 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
RFC5P40937 FO538757.1-201ENST00000623083 1397 ntBASIC18.07■□□□□ 0.48
RFC5P40937 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFC5P40937 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms