Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CDKN1AP38936 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDKN1AP38936 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.05□□□□□ -0.16
CDKN1AP38936 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.05□□□□□ -0.16
CDKN1AP38936 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.05□□□□□ -0.16
CDKN1AP38936 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDKN1AP38936 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 AC005225.4-201ENST00000557330 545 ntBASIC14.05□□□□□ -0.16
CDKN1AP38936 AC073389.1-201ENST00000595595 795 ntBASIC14.05□□□□□ -0.16
CDKN1AP38936 AL138828.2-201ENST00000615812 383 ntBASIC14.05□□□□□ -0.16
CDKN1AP38936 AL590560.3-201ENST00000623350 461 ntBASIC14.05□□□□□ -0.16
CDKN1AP38936 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.05□□□□□ -0.16
CDKN1AP38936 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 AC092068.3-201ENST00000587894 2016 ntBASIC14.05□□□□□ -0.16
CDKN1AP38936 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.05□□□□□ -0.16
CDKN1AP38936 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.05□□□□□ -0.16
CDKN1AP38936 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDKN1AP38936 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 MRPS18AP1-201ENST00000414458 589 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN1AP38936 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN1AP38936 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.04□□□□□ -0.16
CDKN1AP38936 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 TUBB8P12-201ENST00000308911 1335 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.04□□□□□ -0.16
CDKN1AP38936 TUBB7P-202ENST00000428444 1305 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 TUBB8P7-204ENST00000567960 1332 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 AC063926.2-201ENST00000623766 1308 ntBASIC14.04□□□□□ -0.16
CDKN1AP38936 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.04□□□□□ -0.16
CDKN1AP38936 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDKN1AP38936 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDKN1AP38936 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.04□□□□□ -0.16
CDKN1AP38936 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKN1AP38936 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CDKN1AP38936 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDKN1AP38936 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN1AP38936 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.03□□□□□ -0.16
CDKN1AP38936 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN1AP38936 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CDKN1AP38936 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
CDKN1AP38936 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms