Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.13■□□□□ 0.81
TM4SF1P30408 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 AC139713.2-201ENST00000641328 2723 ntBASIC20.13■□□□□ 0.81
TM4SF1P30408 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
TM4SF1P30408 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF1P30408 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 FAM21FP-201ENST00000426241 1131 ntBASIC20.12■□□□□ 0.81
TM4SF1P30408 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AC007551.1-201ENST00000457394 519 ntBASIC20.12■□□□□ 0.81
TM4SF1P30408 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 AC124283.3-201ENST00000570869 594 ntBASIC20.12■□□□□ 0.81
TM4SF1P30408 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.12■□□□□ 0.81
TM4SF1P30408 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.12■□□□□ 0.81
TM4SF1P30408 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM4SF1P30408 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF1P30408 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TM4SF1P30408 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF1P30408 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF1P30408 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TM4SF1P30408 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 MGST3-203ENST00000367885 680 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF1P30408 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 AC004987.2-201ENST00000395959 1148 ntBASIC20.11■□□□□ 0.81
TM4SF1P30408 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF1P30408 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TM4SF1P30408 AC068587.3-201ENST00000526613 355 ntBASIC20.11■□□□□ 0.81
TM4SF1P30408 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF1P30408 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF1P30408 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.11■□□□□ 0.81
TM4SF1P30408 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC20.11■□□□□ 0.81
TM4SF1P30408 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 AL139099.5-201ENST00000635274 300 ntBASIC20.11■□□□□ 0.81
TM4SF1P30408 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF1P30408 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.11■□□□□ 0.81
TM4SF1P30408 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.11■□□□□ 0.81
TM4SF1P30408 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TM4SF1P30408 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.1■□□□□ 0.81
TM4SF1P30408 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.1■□□□□ 0.81
TM4SF1P30408 TOMM22P5-201ENST00000416399 439 ntBASIC20.1■□□□□ 0.81
TM4SF1P30408 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.1■□□□□ 0.81
TM4SF1P30408 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 TARDBPP1-201ENST00000442013 1203 ntBASIC20.1■□□□□ 0.81
TM4SF1P30408 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.1■□□□□ 0.81
TM4SF1P30408 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.1■□□□□ 0.81
TM4SF1P30408 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 PTP4A1P2-201ENST00000546033 454 ntBASIC20.1■□□□□ 0.81
TM4SF1P30408 MIR3615-201ENST00000581999 87 ntBASIC20.1■□□□□ 0.81
TM4SF1P30408 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.1■□□□□ 0.81
TM4SF1P30408 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.1■□□□□ 0.81
TM4SF1P30408 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TM4SF1P30408 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TM4SF1P30408 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.1■□□□□ 0.81
TM4SF1P30408 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms