Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC004967.1-201ENST00000453589 447 ntBASIC14.1□□□□□ -0.15
TNFSF4P23510 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 IGHV3-62-201ENST00000520057 340 ntBASIC14.1□□□□□ -0.15
TNFSF4P23510 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
TNFSF4P23510 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 SNHG9-202ENST00000564014 471 ntBASIC14.1□□□□□ -0.15
TNFSF4P23510 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.1□□□□□ -0.15
TNFSF4P23510 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TNFSF4P23510 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 AL671710.1-201ENST00000610245 2349 ntBASIC14.1□□□□□ -0.15
TNFSF4P23510 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TNFSF4P23510 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.1□□□□□ -0.15
TNFSF4P23510 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TNFSF4P23510 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TNFSF4P23510 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 PCDHA12-202ENST00000613593 2588 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.09□□□□□ -0.15
TNFSF4P23510 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.09□□□□□ -0.15
TNFSF4P23510 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AL135744.1-201ENST00000565098 629 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFSF4P23510 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AC099522.2-201ENST00000607001 744 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 GPALPP1-207ENST00000611650 899 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 AL691403.2-201ENST00000618460 490 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TNFSF4P23510 AC016027.1-202ENST00000607927 1699 ntBASIC14.09□□□□□ -0.15
TNFSF4P23510 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TNFSF4P23510 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFSF4P23510 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TNFSF4P23510 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFSF4P23510 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TNFSF4P23510 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.08□□□□□ -0.15
TNFSF4P23510 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TNFSF4P23510 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
TNFSF4P23510 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TNFSF4P23510 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms