Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCNA3P22001 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.86■□□□□ 0.77
KCNA3P22001 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
KCNA3P22001 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNA3P22001 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 AC134915.1-201ENST00000426461 574 ntBASIC19.85■□□□□ 0.77
KCNA3P22001 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNA3P22001 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNA3P22001 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.85■□□□□ 0.77
KCNA3P22001 KRT90P-201ENST00000549264 1064 ntBASIC19.85■□□□□ 0.77
KCNA3P22001 GNRHR2-203ENST00000581100 1187 ntBASIC19.85■□□□□ 0.77
KCNA3P22001 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.85■□□□□ 0.77
KCNA3P22001 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
KCNA3P22001 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.85■□□□□ 0.77
KCNA3P22001 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.85■□□□□ 0.77
KCNA3P22001 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.85■□□□□ 0.77
KCNA3P22001 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCNA3P22001 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KCNA3P22001 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.84■□□□□ 0.77
KCNA3P22001 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.84■□□□□ 0.77
KCNA3P22001 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
KCNA3P22001 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 AL022328.3-201ENST00000607943 679 ntBASIC19.84■□□□□ 0.77
KCNA3P22001 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KCNA3P22001 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.84■□□□□ 0.77
KCNA3P22001 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
KCNA3P22001 AL391256.1-201ENST00000443260 1855 ntBASIC19.84■□□□□ 0.77
KCNA3P22001 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KCNA3P22001 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCNA3P22001 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
KCNA3P22001 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 INTS4P2-202ENST00000614726 2019 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
KCNA3P22001 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 AC134312.5-201ENST00000568031 1313 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCNA3P22001 GGT4P-201ENST00000623672 1708 ntBASIC19.83■□□□□ 0.77
KCNA3P22001 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms