Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
LMNB1P20700 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LMNB1P20700 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.74■□□□□ 0.75
LMNB1P20700 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC005332.8-201ENST00000622750 2735 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LMNB1P20700 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.74■□□□□ 0.75
LMNB1P20700 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC068587.3-201ENST00000526613 355 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.74■□□□□ 0.75
LMNB1P20700 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC079316.1-201ENST00000548397 411 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.74■□□□□ 0.75
LMNB1P20700 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.74■□□□□ 0.75
LMNB1P20700 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC091271.1-201ENST00000611877 1162 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 AC116353.5-201ENST00000638148 1699 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.74■□□□□ 0.75
LMNB1P20700 AC008764.6-201ENST00000595909 2069 ntBASIC19.74■□□□□ 0.75
LMNB1P20700 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LMNB1P20700 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LMNB1P20700 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.73■□□□□ 0.75
LMNB1P20700 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.73■□□□□ 0.75
LMNB1P20700 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.73■□□□□ 0.75
LMNB1P20700 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 HIST3H2BA-201ENST00000436555 524 ntBASIC19.73■□□□□ 0.75
LMNB1P20700 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.73■□□□□ 0.75
LMNB1P20700 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.73■□□□□ 0.75
LMNB1P20700 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.73■□□□□ 0.75
LMNB1P20700 AC009542.2-202ENST00000619004 1067 ntBASIC19.73■□□□□ 0.75
LMNB1P20700 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
LMNB1P20700 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
LMNB1P20700 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LMNB1P20700 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
LMNB1P20700 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LMNB1P20700 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LMNB1P20700 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.72■□□□□ 0.75
LMNB1P20700 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LMNB1P20700 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.72■□□□□ 0.75
LMNB1P20700 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LMNB1P20700 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.72■□□□□ 0.75
LMNB1P20700 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.72■□□□□ 0.75
LMNB1P20700 RN7SL560P-201ENST00000577943 264 ntBASIC19.72■□□□□ 0.75
LMNB1P20700 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
LMNB1P20700 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 SNX33P1-201ENST00000592116 1762 ntBASIC19.72■□□□□ 0.75
LMNB1P20700 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LMNB1P20700 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms