Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTPS1P17812 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.53■□□□□ 0.24
CTPS1P17812 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.53■□□□□ 0.24
CTPS1P17812 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 AC027612.4-201ENST00000605371 583 ntBASIC16.53■□□□□ 0.24
CTPS1P17812 AC008267.7-201ENST00000624570 1194 ntBASIC16.53■□□□□ 0.24
CTPS1P17812 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
CTPS1P17812 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTPS1P17812 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.53■□□□□ 0.24
CTPS1P17812 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.53■□□□□ 0.24
CTPS1P17812 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 ME2P1-201ENST00000426028 1970 ntBASIC16.53■□□□□ 0.24
CTPS1P17812 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CTPS1P17812 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CTPS1P17812 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CTPS1P17812 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.52■□□□□ 0.24
CTPS1P17812 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AL118508.1-201ENST00000613502 2345 ntBASIC16.52■□□□□ 0.24
CTPS1P17812 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AL627223.1-201ENST00000416693 442 ntBASIC16.52■□□□□ 0.24
CTPS1P17812 FAM58DP-201ENST00000428076 619 ntBASIC16.52■□□□□ 0.24
CTPS1P17812 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.52■□□□□ 0.24
CTPS1P17812 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CTPS1P17812 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.52■□□□□ 0.24
CTPS1P17812 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.52■□□□□ 0.24
CTPS1P17812 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CTPS1P17812 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTPS1P17812 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.52■□□□□ 0.23
CTPS1P17812 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTPS1P17812 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.52■□□□□ 0.23
CTPS1P17812 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CTPS1P17812 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CTPS1P17812 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.52■□□□□ 0.23
CTPS1P17812 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.52■□□□□ 0.23
CTPS1P17812 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.52■□□□□ 0.23
CTPS1P17812 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
CTPS1P17812 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CTPS1P17812 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.51■□□□□ 0.23
CTPS1P17812 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.51■□□□□ 0.23
CTPS1P17812 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.51■□□□□ 0.23
CTPS1P17812 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 KRT18P32-201ENST00000424695 1287 ntBASIC16.51■□□□□ 0.23
CTPS1P17812 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CTPS1P17812 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.51■□□□□ 0.23
CTPS1P17812 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.51■□□□□ 0.23
CTPS1P17812 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.51■□□□□ 0.23
CTPS1P17812 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.51■□□□□ 0.23
CTPS1P17812 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CTPS1P17812 SLC25A39P2-201ENST00000537614 270 ntBASIC16.51■□□□□ 0.23
CTPS1P17812 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms