Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.6■□□□□ 0.09
NCK1P16333 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.6■□□□□ 0.09
NCK1P16333 RN7SL850P-201ENST00000579959 291 ntBASIC15.6■□□□□ 0.09
NCK1P16333 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 AL356309.3-201ENST00000624132 1934 ntBASIC15.6■□□□□ 0.09
NCK1P16333 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.6■□□□□ 0.09
NCK1P16333 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.6■□□□□ 0.09
NCK1P16333 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.6■□□□□ 0.09
NCK1P16333 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.6■□□□□ 0.09
NCK1P16333 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NCK1P16333 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.59■□□□□ 0.09
NCK1P16333 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 AL031133.1-201ENST00000406807 723 ntBASIC15.59■□□□□ 0.09
NCK1P16333 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.59■□□□□ 0.09
NCK1P16333 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.59■□□□□ 0.09
NCK1P16333 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.59■□□□□ 0.09
NCK1P16333 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.59■□□□□ 0.09
NCK1P16333 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.59■□□□□ 0.09
NCK1P16333 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NCK1P16333 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NCK1P16333 AC131009.4-201ENST00000624048 1740 ntBASIC15.59■□□□□ 0.09
NCK1P16333 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NCK1P16333 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NCK1P16333 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.59■□□□□ 0.09
NCK1P16333 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NCK1P16333 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NCK1P16333 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NCK1P16333 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
NCK1P16333 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.09
NCK1P16333 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.58■□□□□ 0.09
NCK1P16333 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
NCK1P16333 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NCK1P16333 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.58■□□□□ 0.09
NCK1P16333 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
NCK1P16333 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.58■□□□□ 0.08
NCK1P16333 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
NCK1P16333 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
NCK1P16333 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.58■□□□□ 0.08
NCK1P16333 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 NCF1C-201ENST00000438382 1427 ntBASIC15.58■□□□□ 0.08
NCK1P16333 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
NCK1P16333 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.58■□□□□ 0.08
NCK1P16333 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NCK1P16333 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NCK1P16333 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
NCK1P16333 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms