Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC130P13994 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 HLA-J-203ENST00000494367 1087 ntBASIC17.4■□□□□ 0.38
CCDC130P13994 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC130P13994 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC130P13994 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.4■□□□□ 0.38
CCDC130P13994 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC130P13994 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 ME2P1-201ENST00000426028 1970 ntBASIC17.4■□□□□ 0.38
CCDC130P13994 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC130P13994 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC130P13994 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC130P13994 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC130P13994 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC130P13994 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC130P13994 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC130P13994 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC130P13994 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC130P13994 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCDC130P13994 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCDC130P13994 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC130P13994 PMS2P2-201ENST00000425039 1128 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 SPDYE14P-201ENST00000442619 822 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC130P13994 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 ALG1L8P-201ENST00000533887 760 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 AC026150.2-201ENST00000564693 1156 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC130P13994 SPTSSB-204ENST00000617024 1292 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 AC092364.2-201ENST00000596710 2692 ntBASIC17.39■□□□□ 0.37
CCDC130P13994 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC130P13994 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC130P13994 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC130P13994 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC130P13994 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC130P13994 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.38■□□□□ 0.37
CCDC130P13994 AC004449.1-201ENST00000564240 433 ntBASIC17.38■□□□□ 0.37
CCDC130P13994 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC130P13994 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC130P13994 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC130P13994 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms