Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.7■□□□□ 0.74
COL11A2P13942 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
COL11A2P13942 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.7■□□□□ 0.74
COL11A2P13942 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COL11A2P13942 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
COL11A2P13942 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.7■□□□□ 0.74
COL11A2P13942 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COL11A2P13942 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.69■□□□□ 0.74
COL11A2P13942 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 PCDHB18P-201ENST00000524813 2368 ntBASIC19.69■□□□□ 0.74
COL11A2P13942 REXO1L8P-201ENST00000604378 1897 ntBASIC19.69■□□□□ 0.74
COL11A2P13942 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
COL11A2P13942 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.69■□□□□ 0.74
COL11A2P13942 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.69■□□□□ 0.74
COL11A2P13942 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.69■□□□□ 0.74
COL11A2P13942 RNA5SP423-201ENST00000517127 109 ntBASIC19.69■□□□□ 0.74
COL11A2P13942 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
COL11A2P13942 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.69■□□□□ 0.74
COL11A2P13942 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
COL11A2P13942 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COL11A2P13942 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COL11A2P13942 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL11A2P13942 AC004987.2-201ENST00000395959 1148 ntBASIC19.68■□□□□ 0.74
COL11A2P13942 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.68■□□□□ 0.74
COL11A2P13942 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC19.68■□□□□ 0.74
COL11A2P13942 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COL11A2P13942 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.68■□□□□ 0.74
COL11A2P13942 AC022137.2-201ENST00000503482 481 ntBASIC19.68■□□□□ 0.74
COL11A2P13942 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.68■□□□□ 0.74
COL11A2P13942 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.68■□□□□ 0.74
COL11A2P13942 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL11A2P13942 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
COL11A2P13942 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.67■□□□□ 0.74
COL11A2P13942 MIR326-201ENST00000362220 95 ntBASIC19.67■□□□□ 0.74
COL11A2P13942 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.67■□□□□ 0.74
COL11A2P13942 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 AC016694.1-201ENST00000434179 700 ntBASIC19.67■□□□□ 0.74
COL11A2P13942 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.67■□□□□ 0.74
COL11A2P13942 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.67■□□□□ 0.74
COL11A2P13942 AC079316.1-201ENST00000548397 411 ntBASIC19.67■□□□□ 0.74
COL11A2P13942 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
COL11A2P13942 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 BNIP3P1-202ENST00000550043 1585 ntBASIC19.67■□□□□ 0.74
COL11A2P13942 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms