Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 AC008608.2-201ENST00000606089 416 ntBASIC14.9□□□□□ -0.02
CLUP10909 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.9□□□□□ -0.02
CLUP10909 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.9□□□□□ -0.02
CLUP10909 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CLUP10909 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CLUP10909 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
CLUP10909 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
CLUP10909 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLUP10909 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.9□□□□□ -0.02
CLUP10909 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 PCGF3-213ENST00000620529 1899 ntBASIC14.89□□□□□ -0.03
CLUP10909 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.89□□□□□ -0.03
CLUP10909 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.89□□□□□ -0.03
CLUP10909 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.89□□□□□ -0.03
CLUP10909 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.89□□□□□ -0.03
CLUP10909 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.89□□□□□ -0.03
CLUP10909 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.89□□□□□ -0.03
CLUP10909 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLUP10909 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLUP10909 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 GPAA1P2-202ENST00000606848 1787 ntBASIC14.88□□□□□ -0.03
CLUP10909 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLUP10909 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.88□□□□□ -0.03
CLUP10909 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.88□□□□□ -0.03
CLUP10909 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 MIR3652-201ENST00000579335 131 ntBASIC14.88□□□□□ -0.03
CLUP10909 CYP2A7P1-201ENST00000595391 815 ntBASIC14.88□□□□□ -0.03
CLUP10909 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.88□□□□□ -0.03
CLUP10909 AC025062.2-201ENST00000605477 670 ntBASIC14.88□□□□□ -0.03
CLUP10909 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 AF228730.7-201ENST00000641842 219 ntBASIC14.88□□□□□ -0.03
CLUP10909 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLUP10909 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLUP10909 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLUP10909 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.88□□□□□ -0.03
CLUP10909 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms