Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DQB2P05538 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 CROCCP1-201ENST00000426910 5675 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 CEND1P1-201ENST00000451006 455 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AC112482.1-201ENST00000492080 688 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AC079140.1-201ENST00000508039 487 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 YBX1P5-201ENST00000509441 847 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 MIR4469-201ENST00000583919 79 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AC027307.2-201ENST00000591252 911 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AC073389.1-201ENST00000595595 795 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 FOXO1B-201ENST00000504678 1527 ntBASIC16.65■□□□□ 0.26
HLA-DQB2P05538 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DQB2P05538 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HLA-DQB2P05538 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HLA-DQB2P05538 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
HLA-DQB2P05538 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AL513523.2-202ENST00000427283 2040 ntBASIC16.64■□□□□ 0.25
HLA-DQB2P05538 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 SPCS2P4-201ENST00000436160 681 ntBASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AC008267.7-201ENST00000624570 1194 ntBASIC16.64■□□□□ 0.25
HLA-DQB2P05538 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DQB2P05538 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms