Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 PMPCAP1-201ENST00000508114 1576 ntBASIC14.23□□□□□ -0.13
HLA-DQB1P01920 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC063952.2-201ENST00000498792 1227 ntBASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TERC-201ENST00000602385 541 ntBASIC14.23□□□□□ -0.13
HLA-DQB1P01920 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC004817.3-201ENST00000602957 2129 ntBASIC14.23□□□□□ -0.13
HLA-DQB1P01920 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 AC243591.1-201ENST00000452967 1364 ntBASIC14.22□□□□□ -0.13
HLA-DQB1P01920 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 IGHV3-41-201ENST00000613121 348 ntBASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PCGF3-213ENST00000620529 1899 ntBASIC14.22□□□□□ -0.13
HLA-DQB1P01920 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DQB1P01920 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms