Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 BICD1-207ENST00000551848 1962 ntBASIC18.51■□□□□ 0.55
ALDH1A1P00352 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
ALDH1A1P00352 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALDH1A1P00352 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 FAM86HP-204ENST00000513466 959 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 KRT90P-201ENST00000549264 1064 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 AP001063.1-201ENST00000568332 529 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 MIR4321-201ENST00000592276 80 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 MIR6727-201ENST00000620702 65 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 AC015967.2-201ENST00000624092 234 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 AC006435.4-201ENST00000625037 234 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 AL356737.1-201ENST00000634391 234 ntBASIC18.5■□□□□ 0.55
ALDH1A1P00352 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.5■□□□□ 0.55
ALDH1A1P00352 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALDH1A1P00352 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 AL512652.2-201ENST00000625156 1716 ntBASIC18.49■□□□□ 0.55
ALDH1A1P00352 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 C1QBPP1-201ENST00000400117 770 ntBASIC18.49■□□□□ 0.55
ALDH1A1P00352 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALDH1A1P00352 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.49■□□□□ 0.55
ALDH1A1P00352 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms