Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLIC3O95833 PCGF3-213ENST00000620529 1899 ntBASIC15.25■□□□□ 0.03
CLIC3O95833 AC020658.6-201ENST00000623564 1870 ntBASIC15.25■□□□□ 0.03
CLIC3O95833 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.25■□□□□ 0.03
CLIC3O95833 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.25■□□□□ 0.03
CLIC3O95833 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 MMP23A-201ENST00000234610 1017 ntBASIC15.24■□□□□ 0.03
CLIC3O95833 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.24■□□□□ 0.03
CLIC3O95833 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CLIC3O95833 AC087499.1-201ENST00000418141 1075 ntBASIC15.24■□□□□ 0.03
CLIC3O95833 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 ACTG1P4-201ENST00000425123 1122 ntBASIC15.24■□□□□ 0.03
CLIC3O95833 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.24■□□□□ 0.03
CLIC3O95833 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.24■□□□□ 0.03
CLIC3O95833 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.24■□□□□ 0.03
CLIC3O95833 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.24■□□□□ 0.03
CLIC3O95833 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.24■□□□□ 0.03
CLIC3O95833 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 TCAF2P1-201ENST00000291129 2421 ntBASIC15.24■□□□□ 0.03
CLIC3O95833 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CLIC3O95833 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CLIC3O95833 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CLIC3O95833 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CLIC3O95833 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
CLIC3O95833 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
CLIC3O95833 HBZP1-201ENST00000354915 429 ntBASIC15.23■□□□□ 0.03
CLIC3O95833 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 MIR1224-201ENST00000408193 85 ntBASIC15.23■□□□□ 0.03
CLIC3O95833 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.23■□□□□ 0.03
CLIC3O95833 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.23■□□□□ 0.03
CLIC3O95833 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.23■□□□□ 0.03
CLIC3O95833 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CLIC3O95833 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CLIC3O95833 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CLIC3O95833 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CLIC3O95833 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.23■□□□□ 0.03
CLIC3O95833 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms