Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST1O76090 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
BEST1O76090 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST1O76090 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.19■□□□□ 0.34
BEST1O76090 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST1O76090 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 AL592424.1-201ENST00000563624 1536 ntBASIC17.19■□□□□ 0.34
BEST1O76090 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
BEST1O76090 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.19■□□□□ 0.34
BEST1O76090 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
BEST1O76090 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
BEST1O76090 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.18■□□□□ 0.34
BEST1O76090 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST1O76090 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST1O76090 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.18■□□□□ 0.34
BEST1O76090 HMGN1P19-201ENST00000436976 333 ntBASIC17.18■□□□□ 0.34
BEST1O76090 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST1O76090 AC125807.1-201ENST00000483097 614 ntBASIC17.18■□□□□ 0.34
BEST1O76090 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.18■□□□□ 0.34
BEST1O76090 AC005498.2-205ENST00000593218 784 ntBASIC17.18■□□□□ 0.34
BEST1O76090 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
BEST1O76090 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
BEST1O76090 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.18■□□□□ 0.34
BEST1O76090 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.18■□□□□ 0.34
BEST1O76090 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
BEST1O76090 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
BEST1O76090 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.17■□□□□ 0.34
BEST1O76090 AC067863.1-201ENST00000494933 530 ntBASIC17.17■□□□□ 0.34
BEST1O76090 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BEST1O76090 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.17■□□□□ 0.34
BEST1O76090 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.17■□□□□ 0.34
BEST1O76090 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms