Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS3O75489 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NDUFS3O75489 MED15P5-201ENST00000423150 992 ntBASIC16.42■□□□□ 0.22
NDUFS3O75489 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFS3O75489 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.42■□□□□ 0.22
NDUFS3O75489 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.42■□□□□ 0.22
NDUFS3O75489 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
NDUFS3O75489 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS3O75489 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS3O75489 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 AL513523.2-202ENST00000427283 2040 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC026691.1-201ENST00000602502 2017 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC140658.5-201ENST00000438532 169 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 KRT18P3-201ENST00000451602 1288 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS3O75489 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC109635.5-201ENST00000533593 962 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.41■□□□□ 0.22
NDUFS3O75489 AC140113.2-201ENST00000604370 208 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS3O75489 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 AL391005.1-201ENST00000623953 2435 ntBASIC16.41■□□□□ 0.22
NDUFS3O75489 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS3O75489 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms