Protein–RNA interactions for Protein: O75154

RAB11FIP3, Rab11 family-interacting protein 3, humanhuman

Predictions only

Length 756 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3O75154 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 AC004835.2-201ENST00000603762 682 ntBASIC20.17■□□□□ 0.82
RAB11FIP3O75154 AC134684.3-201ENST00000641758 218 ntBASIC20.17■□□□□ 0.82
RAB11FIP3O75154 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RAB11FIP3O75154 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AC079328.2-201ENST00000561241 3354 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 FAM220BP-201ENST00000377689 816 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AC005237.2-201ENST00000434368 219 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SLC25A39P2-201ENST00000537614 270 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AC093520.2-201ENST00000561830 333 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 MIR4321-201ENST00000592276 80 ntBASIC20.16■□□□□ 0.82
RAB11FIP3O75154 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.16■□□□□ 0.82
RAB11FIP3O75154 AL513523.2-202ENST00000427283 2040 ntBASIC20.15■□□□□ 0.82
RAB11FIP3O75154 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AL627223.1-201ENST00000416693 442 ntBASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AC004967.1-201ENST00000453589 447 ntBASIC20.15■□□□□ 0.82
RAB11FIP3O75154 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AC024267.1-201ENST00000582320 895 ntBASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 AC026691.1-201ENST00000602502 2017 ntBASIC20.15■□□□□ 0.82
RAB11FIP3O75154 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB11FIP3O75154 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 DOC2GP-204ENST00000639052 2548 ntBASIC20.14■□□□□ 0.82
RAB11FIP3O75154 AL391005.1-201ENST00000623953 2435 ntBASIC20.14■□□□□ 0.82
RAB11FIP3O75154 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
RAB11FIP3O75154 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.14■□□□□ 0.81
RAB11FIP3O75154 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB11FIP3O75154 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms