Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF40O75150 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RNF40O75150 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF40O75150 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF40O75150 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF40O75150 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF40O75150 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.83■□□□□ 0.45
RNF40O75150 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF40O75150 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF40O75150 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
RNF40O75150 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF40O75150 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF40O75150 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNF40O75150 SIGLEC30P-201ENST00000455569 941 ntBASIC17.83■□□□□ 0.44
RNF40O75150 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF40O75150 AC098799.1-201ENST00000504752 800 ntBASIC17.83■□□□□ 0.44
RNF40O75150 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.83■□□□□ 0.44
RNF40O75150 IGHV3-65-201ENST00000523210 341 ntBASIC17.83■□□□□ 0.44
RNF40O75150 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF40O75150 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
RNF40O75150 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 AL513190.1-201ENST00000621254 727 ntBASIC17.83■□□□□ 0.44
RNF40O75150 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF40O75150 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF40O75150 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RNF40O75150 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF40O75150 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RNF40O75150 AC003669.1-201ENST00000334569 611 ntBASIC17.82■□□□□ 0.44
RNF40O75150 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF40O75150 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RNF40O75150 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF40O75150 HCG4B-203ENST00000450128 991 ntBASIC17.82■□□□□ 0.44
RNF40O75150 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
RNF40O75150 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF40O75150 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 AC008667.4-201ENST00000607370 168 ntBASIC17.82■□□□□ 0.44
RNF40O75150 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 AC004790.2-201ENST00000623588 572 ntBASIC17.82■□□□□ 0.44
RNF40O75150 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RNF40O75150 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF40O75150 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF40O75150 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RNF40O75150 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.81■□□□□ 0.44
RNF40O75150 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF40O75150 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF40O75150 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms