Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.85■□□□□ 0.13
CPNE3O75131 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CPNE3O75131 DOC2GP-204ENST00000639052 2548 ntBASIC15.85■□□□□ 0.13
CPNE3O75131 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.84■□□□□ 0.13
CPNE3O75131 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 FAM58DP-201ENST00000428076 619 ntBASIC15.84■□□□□ 0.13
CPNE3O75131 RBPMS2P1-201ENST00000437762 623 ntBASIC15.84■□□□□ 0.13
CPNE3O75131 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.84■□□□□ 0.13
CPNE3O75131 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.84■□□□□ 0.13
CPNE3O75131 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CPNE3O75131 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.84■□□□□ 0.13
CPNE3O75131 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CPNE3O75131 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE3O75131 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE3O75131 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CPNE3O75131 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.83■□□□□ 0.13
CPNE3O75131 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE3O75131 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE3O75131 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.83■□□□□ 0.13
CPNE3O75131 AC016027.1-202ENST00000607927 1699 ntBASIC15.83■□□□□ 0.13
CPNE3O75131 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CPNE3O75131 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CPNE3O75131 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 LINC01225-203ENST00000563550 1244 ntBASIC15.83■□□□□ 0.12
CPNE3O75131 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.83■□□□□ 0.12
CPNE3O75131 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CPNE3O75131 MIR4492-201ENST00000581627 80 ntBASIC15.83■□□□□ 0.12
CPNE3O75131 MIR3197-201ENST00000582241 73 ntBASIC15.83■□□□□ 0.12
CPNE3O75131 AC092364.2-202ENST00000597012 1073 ntBASIC15.83■□□□□ 0.12
CPNE3O75131 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.83■□□□□ 0.12
CPNE3O75131 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CPNE3O75131 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CPNE3O75131 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CPNE3O75131 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms