Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 AC124067.4-201ENST00000519691 2379 ntBASIC16.63■□□□□ 0.25
PRAMEF11O60813 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PRAMEF11O60813 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.63■□□□□ 0.25
PRAMEF11O60813 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AL139400.1-201ENST00000366220 510 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 SPDYE14P-201ENST00000442619 822 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 HLA-J-203ENST00000494367 1087 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 RARRES2P9-201ENST00000565168 469 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AC061975.2-201ENST00000581722 295 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 AC024267.1-201ENST00000582320 895 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 CYP2T1P-202ENST00000641596 2535 ntBASIC16.62■□□□□ 0.25
PRAMEF11O60813 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEF11O60813 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEF11O60813 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEF11O60813 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEF11O60813 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms