Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.09■□□□□ 0.65
CTNND1O60716 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CTNND1O60716 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CTNND1O60716 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 AC006538.1-201ENST00000567905 1585 ntBASIC19.09■□□□□ 0.65
CTNND1O60716 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.09■□□□□ 0.65
CTNND1O60716 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTNND1O60716 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.09■□□□□ 0.65
CTNND1O60716 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CTNND1O60716 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.08■□□□□ 0.65
CTNND1O60716 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CTNND1O60716 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTNND1O60716 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CTNND1O60716 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNND1O60716 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNND1O60716 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 IGHV3-71-201ENST00000523324 359 ntBASIC19.08■□□□□ 0.64
CTNND1O60716 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.08■□□□□ 0.64
CTNND1O60716 WASH4P-201ENST00000564273 1246 ntBASIC19.08■□□□□ 0.64
CTNND1O60716 AC132938.2-201ENST00000579188 680 ntBASIC19.08■□□□□ 0.64
CTNND1O60716 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.08■□□□□ 0.64
CTNND1O60716 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.08■□□□□ 0.64
CTNND1O60716 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 AC007431.3-201ENST00000623221 587 ntBASIC19.08■□□□□ 0.64
CTNND1O60716 AL591163.1-201ENST00000641757 987 ntBASIC19.08■□□□□ 0.64
CTNND1O60716 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.08■□□□□ 0.64
CTNND1O60716 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.08■□□□□ 0.64
CTNND1O60716 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CTNND1O60716 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.08■□□□□ 0.64
CTNND1O60716 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTNND1O60716 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CTNND1O60716 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CTNND1O60716 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.07■□□□□ 0.64
CTNND1O60716 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CTNND1O60716 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNND1O60716 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.07■□□□□ 0.64
CTNND1O60716 TPRX2P-201ENST00000535362 881 ntBASIC19.07■□□□□ 0.64
CTNND1O60716 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.07■□□□□ 0.64
CTNND1O60716 AC099568.2-201ENST00000609194 695 ntBASIC19.07■□□□□ 0.64
CTNND1O60716 AL109936.8-201ENST00000641772 604 ntBASIC19.07■□□□□ 0.64
CTNND1O60716 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CTNND1O60716 OR6D1P-202ENST00000641007 5290 ntBASIC19.07■□□□□ 0.64
CTNND1O60716 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNND1O60716 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNND1O60716 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CTNND1O60716 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.07■□□□□ 0.64
CTNND1O60716 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTNND1O60716 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms