Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.73■□□□□ 0.11
LCMT2O60294 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 RN7SL589P-201ENST00000481268 310 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 PRYP6-201ENST00000514804 343 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.73■□□□□ 0.11
LCMT2O60294 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.73■□□□□ 0.11
LCMT2O60294 AC022145.2-201ENST00000598203 171 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 AC008267.7-201ENST00000624570 1194 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 AC134684.3-201ENST00000641758 218 ntBASIC15.73■□□□□ 0.11
LCMT2O60294 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.73■□□□□ 0.11
LCMT2O60294 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LCMT2O60294 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
LCMT2O60294 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.73■□□□□ 0.11
LCMT2O60294 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LCMT2O60294 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LCMT2O60294 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 AL592309.1-201ENST00000443127 649 ntBASIC15.72■□□□□ 0.11
LCMT2O60294 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
LCMT2O60294 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.72■□□□□ 0.11
LCMT2O60294 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.72■□□□□ 0.11
LCMT2O60294 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.72■□□□□ 0.11
LCMT2O60294 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
LCMT2O60294 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 AC073389.1-201ENST00000595595 795 ntBASIC15.72■□□□□ 0.11
LCMT2O60294 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.72■□□□□ 0.11
LCMT2O60294 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 AL513210.1-201ENST00000629608 234 ntBASIC15.72■□□□□ 0.11
LCMT2O60294 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 FOXO1B-201ENST00000504678 1527 ntBASIC15.72■□□□□ 0.11
LCMT2O60294 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LCMT2O60294 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
LCMT2O60294 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCMT2O60294 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LCMT2O60294 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.71■□□□□ 0.11
LCMT2O60294 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LCMT2O60294 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.71■□□□□ 0.11
LCMT2O60294 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
LCMT2O60294 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
LCMT2O60294 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
LCMT2O60294 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCMT2O60294 MIR346-201ENST00000362234 95 ntBASIC15.71■□□□□ 0.11
LCMT2O60294 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LCMT2O60294 MIR1233-2-201ENST00000408138 82 ntBASIC15.71■□□□□ 0.11
LCMT2O60294 MIR1233-1-201ENST00000408722 82 ntBASIC15.71■□□□□ 0.11
LCMT2O60294 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.71■□□□□ 0.11
LCMT2O60294 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms