Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SPTBN2O15020 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
SPTBN2O15020 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPTBN2O15020 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.5■□□□□ 0.07
SPTBN2O15020 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.5■□□□□ 0.07
SPTBN2O15020 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPTBN2O15020 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SPTBN2O15020 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.5■□□□□ 0.07
SPTBN2O15020 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SPTBN2O15020 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SPTBN2O15020 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPTBN2O15020 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SPTBN2O15020 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC15.49■□□□□ 0.07
SPTBN2O15020 AC012441.1-201ENST00000446669 685 ntBASIC15.49■□□□□ 0.07
SPTBN2O15020 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.49■□□□□ 0.07
SPTBN2O15020 IQSEC3P1-201ENST00000538799 536 ntBASIC15.49■□□□□ 0.07
SPTBN2O15020 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.49■□□□□ 0.07
SPTBN2O15020 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.49■□□□□ 0.07
SPTBN2O15020 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.49■□□□□ 0.07
SPTBN2O15020 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.49■□□□□ 0.07
SPTBN2O15020 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.49■□□□□ 0.07
SPTBN2O15020 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.49■□□□□ 0.07
SPTBN2O15020 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.49■□□□□ 0.07
SPTBN2O15020 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.49■□□□□ 0.07
SPTBN2O15020 AP006547.1-201ENST00000563435 692 ntBASIC15.49■□□□□ 0.07
SPTBN2O15020 EEF1DP1-201ENST00000585891 896 ntBASIC15.49■□□□□ 0.07
SPTBN2O15020 AP003419.4-201ENST00000616071 517 ntBASIC15.49■□□□□ 0.07
SPTBN2O15020 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.49■□□□□ 0.07
SPTBN2O15020 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SPTBN2O15020 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPTBN2O15020 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.48■□□□□ 0.07
SPTBN2O15020 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 MTX1P1-201ENST00000440904 838 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.48■□□□□ 0.07
SPTBN2O15020 AC026979.3-201ENST00000607315 403 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SPTBN2O15020 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 MIR1227-201ENST00000408484 88 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 AC134698.3-201ENST00000523880 214 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.48■□□□□ 0.07
SPTBN2O15020 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SPTBN2O15020 FRMD8P1-201ENST00000440433 1524 ntBASIC15.48■□□□□ 0.07
SPTBN2O15020 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.48■□□□□ 0.07
SPTBN2O15020 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.48■□□□□ 0.07
SPTBN2O15020 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.47■□□□□ 0.07
SPTBN2O15020 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.47■□□□□ 0.07
SPTBN2O15020 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.47■□□□□ 0.07
SPTBN2O15020 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SPTBN2O15020 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SPTBN2O15020 AC018735.1-201ENST00000437208 1502 ntBASIC15.47■□□□□ 0.07
SPTBN2O15020 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms