Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
COLCA2A8K830 AC079776.2-201ENST00000641154 1609 ntBASIC12.61□□□□□ -0.39
COLCA2A8K830 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.61□□□□□ -0.39
COLCA2A8K830 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
COLCA2A8K830 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 AL591122.2-201ENST00000624125 1853 ntBASIC12.61□□□□□ -0.39
COLCA2A8K830 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
COLCA2A8K830 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.61□□□□□ -0.39
COLCA2A8K830 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.61□□□□□ -0.39
COLCA2A8K830 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
COLCA2A8K830 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
COLCA2A8K830 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.6□□□□□ -0.39
COLCA2A8K830 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
COLCA2A8K830 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.6□□□□□ -0.39
COLCA2A8K830 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 KRT18P11-201ENST00000435214 1283 ntBASIC12.6□□□□□ -0.39
COLCA2A8K830 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.6□□□□□ -0.39
COLCA2A8K830 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.6□□□□□ -0.39
COLCA2A8K830 DUX4L17-201ENST00000557360 1267 ntBASIC12.6□□□□□ -0.39
COLCA2A8K830 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.6□□□□□ -0.39
COLCA2A8K830 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
COLCA2A8K830 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
COLCA2A8K830 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.6□□□□□ -0.39
COLCA2A8K830 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.6□□□□□ -0.39
COLCA2A8K830 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
COLCA2A8K830 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
COLCA2A8K830 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 AC015909.5-201ENST00000624336 2266 ntBASIC12.59□□□□□ -0.39
COLCA2A8K830 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
COLCA2A8K830 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
COLCA2A8K830 AC011474.4-201ENST00000623523 2076 ntBASIC12.59□□□□□ -0.39
COLCA2A8K830 AC126335.2-201ENST00000623362 4637 ntBASIC12.59□□□□□ -0.39
COLCA2A8K830 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.59□□□□□ -0.39
COLCA2A8K830 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms