Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 AL356740.2-201ENST00000601559 647 ntBASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA11Q9Y5I1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26■■□□□ 1.75
PCDHA11Q9Y5I1 AC092666.2-201ENST00000613287 246 ntBASIC26■■□□□ 1.75
PCDHA11Q9Y5I1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA11Q9Y5I1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA11Q9Y5I1 MIR4281-201ENST00000580852 62 ntBASIC25.99■■□□□ 1.75
PCDHA11Q9Y5I1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.99■■□□□ 1.75
PCDHA11Q9Y5I1 MIR4466-201ENST00000606121 54 ntBASIC25.99■■□□□ 1.75
PCDHA11Q9Y5I1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDHA11Q9Y5I1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 MTDHP2-201ENST00000601468 714 ntBASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA11Q9Y5I1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA11Q9Y5I1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA11Q9Y5I1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDHA11Q9Y5I1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PCDHA11Q9Y5I1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA11Q9Y5I1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA11Q9Y5I1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.75
PCDHA11Q9Y5I1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHA11Q9Y5I1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
PCDHA11Q9Y5I1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA11Q9Y5I1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA11Q9Y5I1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHA11Q9Y5I1 RARRES2P6-201ENST00000567333 442 ntBASIC25.94■■□□□ 1.74
PCDHA11Q9Y5I1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA11Q9Y5I1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA11Q9Y5I1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA11Q9Y5I1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA11Q9Y5I1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA11Q9Y5I1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA11Q9Y5I1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA11Q9Y5I1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA11Q9Y5I1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 BX255925.1-201ENST00000566954 1854 ntBASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA11Q9Y5I1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA11Q9Y5I1 AL121749.1-202ENST00000609313 2153 ntBASIC25.9■■□□□ 1.74
PCDHA11Q9Y5I1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA11Q9Y5I1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA11Q9Y5I1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.9■■□□□ 1.74
PCDHA11Q9Y5I1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA11Q9Y5I1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.89■■□□□ 1.74
PCDHA11Q9Y5I1 AL512631.2-201ENST00000604634 923 ntBASIC25.89■■□□□ 1.74
PCDHA11Q9Y5I1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHA11Q9Y5I1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PCDHA11Q9Y5I1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA11Q9Y5I1 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA11Q9Y5I1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.86■■□□□ 1.73
PCDHA11Q9Y5I1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA11Q9Y5I1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA11Q9Y5I1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA11Q9Y5I1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms