Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX47Q9H0S4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.7■■□□□ 1.54
DDX47Q9H0S4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX47Q9H0S4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.69■■□□□ 1.54
DDX47Q9H0S4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX47Q9H0S4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX47Q9H0S4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX47Q9H0S4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX47Q9H0S4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.67■■□□□ 1.54
DDX47Q9H0S4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX47Q9H0S4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX47Q9H0S4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DDX47Q9H0S4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX47Q9H0S4 ZNRF2P2-203ENST00000454624 420 ntBASIC24.64■■□□□ 1.54
DDX47Q9H0S4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.64■■□□□ 1.54
DDX47Q9H0S4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
DDX47Q9H0S4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX47Q9H0S4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX47Q9H0S4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX47Q9H0S4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.64■■□□□ 1.53
DDX47Q9H0S4 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.64■■□□□ 1.53
DDX47Q9H0S4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 AC126177.7-201ENST00000547904 679 ntBASIC24.63■■□□□ 1.53
DDX47Q9H0S4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX47Q9H0S4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 CR559946.2-201ENST00000623684 991 ntBASIC24.62■■□□□ 1.53
DDX47Q9H0S4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX47Q9H0S4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX47Q9H0S4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX47Q9H0S4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX47Q9H0S4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX47Q9H0S4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.6■■□□□ 1.53
DDX47Q9H0S4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX47Q9H0S4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX47Q9H0S4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX47Q9H0S4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX47Q9H0S4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX47Q9H0S4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX47Q9H0S4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX47Q9H0S4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX47Q9H0S4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX47Q9H0S4 AC141586.4-201ENST00000624558 1573 ntBASIC24.58■■□□□ 1.52
DDX47Q9H0S4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.58■■□□□ 1.52
DDX47Q9H0S4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
DDX47Q9H0S4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.57■■□□□ 1.52
DDX47Q9H0S4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms