Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
S1PR3Q99500 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.47■□□□□ 0.71
S1PR3Q99500 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
S1PR3Q99500 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
S1PR3Q99500 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
S1PR3Q99500 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
S1PR3Q99500 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.46■□□□□ 0.71
S1PR3Q99500 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.46■□□□□ 0.71
S1PR3Q99500 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.46■□□□□ 0.71
S1PR3Q99500 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
S1PR3Q99500 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.46■□□□□ 0.71
S1PR3Q99500 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
S1PR3Q99500 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
S1PR3Q99500 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
S1PR3Q99500 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
S1PR3Q99500 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.44■□□□□ 0.7
S1PR3Q99500 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
S1PR3Q99500 AC138932.3-201ENST00000567634 1902 ntBASIC19.43■□□□□ 0.7
S1PR3Q99500 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.43■□□□□ 0.7
S1PR3Q99500 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
S1PR3Q99500 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
S1PR3Q99500 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
S1PR3Q99500 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
S1PR3Q99500 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
S1PR3Q99500 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
S1PR3Q99500 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
S1PR3Q99500 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
S1PR3Q99500 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
S1PR3Q99500 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.42■□□□□ 0.7
S1PR3Q99500 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
S1PR3Q99500 KRT18P10-201ENST00000388836 1287 ntBASIC19.42■□□□□ 0.7
S1PR3Q99500 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
S1PR3Q99500 AC093323.1-202ENST00000635031 2045 ntBASIC19.42■□□□□ 0.7
S1PR3Q99500 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.42■□□□□ 0.7
S1PR3Q99500 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
S1PR3Q99500 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
S1PR3Q99500 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
S1PR3Q99500 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
S1PR3Q99500 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
S1PR3Q99500 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
S1PR3Q99500 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
S1PR3Q99500 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
S1PR3Q99500 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
S1PR3Q99500 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
S1PR3Q99500 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
S1PR3Q99500 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
S1PR3Q99500 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.4■□□□□ 0.7
S1PR3Q99500 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.4■□□□□ 0.7
S1PR3Q99500 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.4■□□□□ 0.7
S1PR3Q99500 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
S1PR3Q99500 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
S1PR3Q99500 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
S1PR3Q99500 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
S1PR3Q99500 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
S1PR3Q99500 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.38■□□□□ 0.69
S1PR3Q99500 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
S1PR3Q99500 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.38■□□□□ 0.69
S1PR3Q99500 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.38■□□□□ 0.69
S1PR3Q99500 RAP2CP1-202ENST00000605179 643 ntBASIC19.38■□□□□ 0.69
S1PR3Q99500 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 AC026202.3-201ENST00000600805 1127 ntBASIC19.37■□□□□ 0.69
S1PR3Q99500 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
S1PR3Q99500 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
S1PR3Q99500 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
S1PR3Q99500 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
S1PR3Q99500 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.36■□□□□ 0.69
S1PR3Q99500 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
S1PR3Q99500 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
S1PR3Q99500 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
S1PR3Q99500 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.35■□□□□ 0.69
S1PR3Q99500 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
S1PR3Q99500 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S1PR3Q99500 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
S1PR3Q99500 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
S1PR3Q99500 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
S1PR3Q99500 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms