Protein–RNA interactions for Protein: Q99219

TY3A-I, Transposon Ty3-I Gag polyprotein, yeastyeast

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY3A-IQ99219 XBP1YIL101C 1944 nt6.35□□□□□ -1.39
TY3A-IQ99219 YCR097W-AYCR097W-A 267 nt6.35□□□□□ -1.39
TY3A-IQ99219 YEA6YEL006W 1008 nt6.35□□□□□ -1.39
TY3A-IQ99219 YNL296WYNL296W 315 nt6.35□□□□□ -1.39
TY3A-IQ99219 YBR230W-AYBR230W-A 201 nt6.35□□□□□ -1.39
TY3A-IQ99219 KKQ8YKL168C 2175 nt6.35□□□□□ -1.39
TY3A-IQ99219 SES1YDR023W 1389 nt6.34□□□□□ -1.39
TY3A-IQ99219 RTT106YNL206C 1368 nt6.34□□□□□ -1.39
TY3A-IQ99219 NOB1YOR056C 1380 nt6.34□□□□□ -1.39
TY3A-IQ99219 SLO1YER180C-A 258 nt6.34□□□□□ -1.39
TY3A-IQ99219 HSX1tR(CCU)J 72 nt6.34□□□□□ -1.39
TY3A-IQ99219 DMA1YHR115C 1251 nt6.34□□□□□ -1.39
TY3A-IQ99219 YJR115WYJR115W 510 nt6.34□□□□□ -1.39
TY3A-IQ99219 YPL062WYPL062W 405 nt6.34□□□□□ -1.39
TY3A-IQ99219 ATG22YCL038C 1587 nt6.34□□□□□ -1.39
TY3A-IQ99219 YFL052WYFL052W 1398 nt6.33□□□□□ -1.4
TY3A-IQ99219 HXT17YNR072W 1695 nt6.33□□□□□ -1.4
TY3A-IQ99219 NDC1YML031W 1968 nt6.33□□□□□ -1.4
TY3A-IQ99219 APE3YBR286W 1614 nt6.33□□□□□ -1.4
TY3A-IQ99219 SNU71YGR013W 1863 nt6.33□□□□□ -1.4
TY3A-IQ99219 RPT3YDR394W 1287 nt6.33□□□□□ -1.4
TY3A-IQ99219 DJP1YIR004W 1299 nt6.33□□□□□ -1.4
TY3A-IQ99219 COX5AYNL052W 462 nt6.33□□□□□ -1.4
TY3A-IQ99219 BSC4YNL269W 396 nt6.33□□□□□ -1.4
TY3A-IQ99219 SPS22YCL048W 1392 nt6.32□□□□□ -1.4
TY3A-IQ99219 COT1YOR316C 1320 nt6.32□□□□□ -1.4
TY3A-IQ99219 PGM1YKL127W 1713 nt6.32□□□□□ -1.4
TY3A-IQ99219 ORC5YNL261W 1440 nt6.32□□□□□ -1.4
TY3A-IQ99219 IRS4YKR019C 1848 nt6.32□□□□□ -1.4
TY3A-IQ99219 CMR1YDL156W 1569 nt6.31□□□□□ -1.4
TY3A-IQ99219 MSS1YMR023C 1581 nt6.31□□□□□ -1.4
TY3A-IQ99219 RPT6YGL048C 1218 nt6.31□□□□□ -1.4
TY3A-IQ99219 ATP14YLR295C 375 nt6.31□□□□□ -1.4
TY3A-IQ99219 YOR342CYOR342C 960 nt6.31□□□□□ -1.4
TY3A-IQ99219 YPL041CYPL041C 624 nt6.31□□□□□ -1.4
TY3A-IQ99219 PDR18YNR070W 4002 nt6.31□□□□□ -1.4
TY3A-IQ99219 PSY4YBL046W 1326 nt6.3□□□□□ -1.4
TY3A-IQ99219 RIO1YOR119C 1455 nt6.3□□□□□ -1.4
TY3A-IQ99219 TFS1YLR178C 660 nt6.3□□□□□ -1.4
TY3A-IQ99219 PIN2YOR104W 849 nt6.3□□□□□ -1.4
TY3A-IQ99219 MCM3YEL032W 2916 nt6.29□□□□□ -1.4
TY3A-IQ99219 UTR4YEL038W 684 nt6.29□□□□□ -1.4
TY3A-IQ99219 YIR042CYIR042C 711 nt6.29□□□□□ -1.4
TY3A-IQ99219 RAP1YNL216W 2484 nt6.29□□□□□ -1.4
TY3A-IQ99219 SAM4YPL273W 978 nt6.29□□□□□ -1.4
TY3A-IQ99219 MSN2YMR037C 2115 nt6.29□□□□□ -1.4
TY3A-IQ99219 OPT1YJL212C 2400 nt6.28□□□□□ -1.4
TY3A-IQ99219 COX9YDL067C 180 nt6.28□□□□□ -1.4
TY3A-IQ99219 YOR318CYOR318C 306 nt6.28□□□□□ -1.4
TY3A-IQ99219 PAP2YOL115W 1755 nt6.28□□□□□ -1.4
TY3A-IQ99219 YDR109CYDR109C 2148 nt6.28□□□□□ -1.4
TY3A-IQ99219 MTC1YJL123C 1437 nt6.27□□□□□ -1.41
TY3A-IQ99219 APS3YJL024C 585 nt6.27□□□□□ -1.41
TY3A-IQ99219 CIS3YJL158C 684 nt6.27□□□□□ -1.41
TY3A-IQ99219 BUD9YGR041W 1644 nt6.27□□□□□ -1.41
TY3A-IQ99219 HXT2YMR011W 1626 nt6.27□□□□□ -1.41
TY3A-IQ99219 HIS7YBR248C 1659 nt6.26□□□□□ -1.41
TY3A-IQ99219 YRF1-4YLR466W 4149 nt6.26□□□□□ -1.41
TY3A-IQ99219 COX26YDR119W-A 201 nt6.26□□□□□ -1.41
TY3A-IQ99219 CAD1YDR423C 1230 nt6.26□□□□□ -1.41
TY3A-IQ99219 IDP3YNL009W 1263 nt6.26□□□□□ -1.41
TY3A-IQ99219 RPN7YPR108W 1290 nt6.26□□□□□ -1.41
TY3A-IQ99219 EEB1YPL095C 1371 nt6.26□□□□□ -1.41
TY3A-IQ99219 PRP46YPL151C 1356 nt6.26□□□□□ -1.41
TY3A-IQ99219 GET3YDL100C 1065 nt6.25□□□□□ -1.41
TY3A-IQ99219 ICS3YJL077C 396 nt6.25□□□□□ -1.41
TY3A-IQ99219 YME1YPR024W 2244 nt6.25□□□□□ -1.41
TY3A-IQ99219 IMA5YJL216C 1746 nt6.25□□□□□ -1.41
TY3A-IQ99219 FRS2YFL022C 1512 nt6.25□□□□□ -1.41
TY3A-IQ99219 YIL055CYIL055C 1884 nt6.24□□□□□ -1.41
TY3A-IQ99219 GIT1YCR098C 1557 nt6.24□□□□□ -1.41
TY3A-IQ99219 YEL053W-AYEL053W-A 348 nt6.24□□□□□ -1.41
TY3A-IQ99219 LYS12YIL094C 1116 nt6.24□□□□□ -1.41
TY3A-IQ99219 COA1YIL157C 594 nt6.24□□□□□ -1.41
TY3A-IQ99219 YLL059CYLL059C 507 nt6.24□□□□□ -1.41
TY3A-IQ99219 CSG2YBR036C 1233 nt6.24□□□□□ -1.41
TY3A-IQ99219 TFC6YDR362C 2019 nt6.24□□□□□ -1.41
TY3A-IQ99219 TEP1YNL128W 1305 nt6.24□□□□□ -1.41
TY3A-IQ99219 VPS61YDR136C 573 nt6.23□□□□□ -1.41
TY3A-IQ99219 HCR1YLR192C 798 nt6.23□□□□□ -1.41
TY3A-IQ99219 MRPL4YLR439W 960 nt6.23□□□□□ -1.41
TY3A-IQ99219 YOL097W-AYOL097W-A 186 nt6.22□□□□□ -1.41
TY3A-IQ99219 MMP1YLL061W 1752 nt6.21□□□□□ -1.41
TY3A-IQ99219 PPM1YDR435C 987 nt6.21□□□□□ -1.42
TY3A-IQ99219 PAD1YDR538W 729 nt6.21□□□□□ -1.42
TY3A-IQ99219 YER010CYER010C 705 nt6.21□□□□□ -1.42
TY3A-IQ99219 TRP5YGL026C 2124 nt6.21□□□□□ -1.42
TY3A-IQ99219 GAT3YLR013W 426 nt6.21□□□□□ -1.42
TY3A-IQ99219 IFA38YBR159W 1044 nt6.21□□□□□ -1.42
TY3A-IQ99219 CRP1YHR146W 1398 nt6.2□□□□□ -1.42
TY3A-IQ99219 MAK32YCR019W 1092 nt6.2□□□□□ -1.42
TY3A-IQ99219 NPA3YJR072C 1158 nt6.2□□□□□ -1.42
TY3A-IQ99219 YNR040WYNR040W 771 nt6.2□□□□□ -1.42
TY3A-IQ99219 CBC2YPL178W 627 nt6.2□□□□□ -1.42
TY3A-IQ99219 LDB19YOR322C 2457 nt6.19□□□□□ -1.42
TY3A-IQ99219 YDL034WYDL034W 345 nt6.19□□□□□ -1.42
TY3A-IQ99219 DUS4YLR405W 1104 nt6.19□□□□□ -1.42
TY3A-IQ99219 PET112YBL080C 1626 nt6.18□□□□□ -1.42
TY3A-IQ99219 COS9YKL219W 1224 nt6.18□□□□□ -1.42
TY3A-IQ99219 YML6YML025C 861 nt6.18□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms