Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH19Q8TAB3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH19Q8TAB3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH19Q8TAB3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH19Q8TAB3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 U85056.1-201ENST00000616429 682 ntBASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH19Q8TAB3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH19Q8TAB3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 SPCS2P3-201ENST00000500401 656 ntBASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDH19Q8TAB3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PCDH19Q8TAB3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDH19Q8TAB3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH19Q8TAB3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDH19Q8TAB3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PCDH19Q8TAB3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDH19Q8TAB3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDH19Q8TAB3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDH19Q8TAB3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 KRT18P10-201ENST00000388836 1287 ntBASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH19Q8TAB3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH19Q8TAB3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDH19Q8TAB3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH19Q8TAB3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 DUX4L9-201ENST00000449051 1259 ntBASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH19Q8TAB3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 KRT18P60-201ENST00000312876 1297 ntBASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDH19Q8TAB3 AL033527.3-201ENST00000566366 1196 ntBASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms