Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHDHQ8NE62 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CHDHQ8NE62 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHDHQ8NE62 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CHDHQ8NE62 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CHDHQ8NE62 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CHDHQ8NE62 AC096887.2-201ENST00000623443 1957 ntBASIC22.38■■□□□ 1.17
CHDHQ8NE62 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CHDHQ8NE62 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHDHQ8NE62 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHDHQ8NE62 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.37■■□□□ 1.17
CHDHQ8NE62 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHDHQ8NE62 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.37■■□□□ 1.17
CHDHQ8NE62 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.37■■□□□ 1.17
CHDHQ8NE62 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 AC022211.4-201ENST00000625094 2161 ntBASIC22.36■■□□□ 1.17
CHDHQ8NE62 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 NTF6A-201ENST00000591175 560 ntBASIC22.36■■□□□ 1.17
CHDHQ8NE62 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.36■■□□□ 1.17
CHDHQ8NE62 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHDHQ8NE62 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CHDHQ8NE62 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHDHQ8NE62 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.35■■□□□ 1.17
CHDHQ8NE62 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHDHQ8NE62 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHDHQ8NE62 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CHDHQ8NE62 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.34■■□□□ 1.17
CHDHQ8NE62 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHDHQ8NE62 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHDHQ8NE62 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CHDHQ8NE62 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CHDHQ8NE62 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHDHQ8NE62 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CHDHQ8NE62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHDHQ8NE62 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CHDHQ8NE62 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CHDHQ8NE62 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.31■■□□□ 1.16
CHDHQ8NE62 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.31■■□□□ 1.16
CHDHQ8NE62 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.31■■□□□ 1.16
CHDHQ8NE62 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CHDHQ8NE62 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.3■■□□□ 1.16
CHDHQ8NE62 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
CHDHQ8NE62 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.3■■□□□ 1.16
CHDHQ8NE62 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CHDHQ8NE62 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CHDHQ8NE62 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.29■■□□□ 1.16
CHDHQ8NE62 RP9P-202ENST00000450133 1212 ntBASIC22.29■■□□□ 1.16
CHDHQ8NE62 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CHDHQ8NE62 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CHDHQ8NE62 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CHDHQ8NE62 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 AC012676.1-201ENST00000574705 1949 ntBASIC22.28■■□□□ 1.16
CHDHQ8NE62 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.28■■□□□ 1.16
CHDHQ8NE62 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHDHQ8NE62 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHDHQ8NE62 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHDHQ8NE62 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CHDHQ8NE62 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHDHQ8NE62 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.27■■□□□ 1.16
CHDHQ8NE62 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CHDHQ8NE62 AC007029.1-201ENST00000604183 313 ntBASIC22.27■■□□□ 1.16
CHDHQ8NE62 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHDHQ8NE62 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CHDHQ8NE62 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHDHQ8NE62 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.26■■□□□ 1.15
CHDHQ8NE62 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms