Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
COMMD1Q8N668 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 ECEL1P2-201ENST00000461596 1295 ntBASIC19.51■□□□□ 0.71
COMMD1Q8N668 ABHD17AP5-201ENST00000580133 923 ntBASIC19.51■□□□□ 0.71
COMMD1Q8N668 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
COMMD1Q8N668 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COMMD1Q8N668 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.51■□□□□ 0.71
COMMD1Q8N668 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.51■□□□□ 0.71
COMMD1Q8N668 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
COMMD1Q8N668 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.5■□□□□ 0.71
COMMD1Q8N668 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 AC092296.2-201ENST00000589470 999 ntBASIC19.5■□□□□ 0.71
COMMD1Q8N668 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD1Q8N668 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COMMD1Q8N668 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.5■□□□□ 0.71
COMMD1Q8N668 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.49■□□□□ 0.71
COMMD1Q8N668 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD1Q8N668 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.49■□□□□ 0.71
COMMD1Q8N668 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD1Q8N668 AP004609.3-201ENST00000610705 1884 ntBASIC19.49■□□□□ 0.71
COMMD1Q8N668 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD1Q8N668 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COMMD1Q8N668 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.49■□□□□ 0.71
COMMD1Q8N668 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 WHAMMP3-201ENST00000611636 1609 ntBASIC19.48■□□□□ 0.71
COMMD1Q8N668 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.48■□□□□ 0.71
COMMD1Q8N668 AC138932.3-201ENST00000567634 1902 ntBASIC19.48■□□□□ 0.71
COMMD1Q8N668 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COMMD1Q8N668 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD1Q8N668 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COMMD1Q8N668 AL359258.2-201ENST00000564063 1566 ntBASIC19.47■□□□□ 0.71
COMMD1Q8N668 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COMMD1Q8N668 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
COMMD1Q8N668 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.47■□□□□ 0.71
COMMD1Q8N668 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COMMD1Q8N668 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COMMD1Q8N668 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.46■□□□□ 0.71
COMMD1Q8N668 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.46■□□□□ 0.71
COMMD1Q8N668 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COMMD1Q8N668 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.46■□□□□ 0.71
COMMD1Q8N668 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COMMD1Q8N668 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD1Q8N668 AC022211.4-201ENST00000625094 2161 ntBASIC19.45■□□□□ 0.7
COMMD1Q8N668 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD1Q8N668 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COMMD1Q8N668 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COMMD1Q8N668 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
COMMD1Q8N668 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COMMD1Q8N668 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
COMMD1Q8N668 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD1Q8N668 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD1Q8N668 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COMMD1Q8N668 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD1Q8N668 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD1Q8N668 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COMMD1Q8N668 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD1Q8N668 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD1Q8N668 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COMMD1Q8N668 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD1Q8N668 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD1Q8N668 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD1Q8N668 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COMMD1Q8N668 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.41■□□□□ 0.7
COMMD1Q8N668 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COMMD1Q8N668 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COMMD1Q8N668 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD1Q8N668 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.39■□□□□ 0.69
COMMD1Q8N668 AL157400.5-201ENST00000507624 621 ntBASIC19.39■□□□□ 0.69
COMMD1Q8N668 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD1Q8N668 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD1Q8N668 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD1Q8N668 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.39■□□□□ 0.69
COMMD1Q8N668 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COMMD1Q8N668 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD1Q8N668 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COMMD1Q8N668 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms