Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.8■■□□□ 1.08
PRAMEF20Q5VT98 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PRAMEF20Q5VT98 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRAMEF20Q5VT98 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 AL451085.2-201ENST00000605085 799 ntBASIC21.77■■□□□ 1.08
PRAMEF20Q5VT98 AC091060.1-201ENST00000623524 1766 ntBASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
PRAMEF20Q5VT98 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AC103724.3-201ENST00000564481 992 ntBASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEF20Q5VT98 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEF20Q5VT98 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.73■■□□□ 1.07
PRAMEF20Q5VT98 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 AL031848.2-201ENST00000607670 837 ntBASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 AC097639.1-201ENST00000565519 1891 ntBASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRAMEF20Q5VT98 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRAMEF20Q5VT98 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
PRAMEF20Q5VT98 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF20Q5VT98 DUSP8P4-201ENST00000399538 1761 ntBASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 AC145676.1-201ENST00000514988 2004 ntBASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF20Q5VT98 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AC022616.5-201ENST00000518796 181 ntBASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 AL035685.1-201ENST00000636663 812 ntBASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF20Q5VT98 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 AL592295.1-201ENST00000400984 884 ntBASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 AC009299.2-201ENST00000482477 511 ntBASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF20Q5VT98 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF20Q5VT98 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 FOXO3B-201ENST00000395675 1928 ntBASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF20Q5VT98 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms