Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRFAM7AQ494W8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRFAM7AQ494W8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHRFAM7AQ494W8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHRFAM7AQ494W8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.54■□□□□ 0.88
CHRFAM7AQ494W8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 KRT8P33-201ENST00000508125 1423 ntBASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 YBX1P4-201ENST00000392794 808 ntBASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 RP9P-202ENST00000450133 1212 ntBASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHRFAM7AQ494W8 ERN1-208ENST00000606895 2068 ntBASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 AC009299.2-201ENST00000482477 511 ntBASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 AC010980.1-201ENST00000587192 1142 ntBASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHRFAM7AQ494W8 AC010501.1-201ENST00000606270 1962 ntBASIC20.52■□□□□ 0.87
CHRFAM7AQ494W8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 AC139795.1-202ENST00000500444 432 ntBASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHRFAM7AQ494W8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CHRFAM7AQ494W8 DUX4L9-201ENST00000449051 1259 ntBASIC20.5■□□□□ 0.87
CHRFAM7AQ494W8 AC026202.3-201ENST00000600805 1127 ntBASIC20.5■□□□□ 0.87
CHRFAM7AQ494W8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHRFAM7AQ494W8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHRFAM7AQ494W8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 THA1P-201ENST00000590384 1145 ntBASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHRFAM7AQ494W8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 AC142381.3-201ENST00000568208 1670 ntBASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHRFAM7AQ494W8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.45■□□□□ 0.87
CHRFAM7AQ494W8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRFAM7AQ494W8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRFAM7AQ494W8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRFAM7AQ494W8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRFAM7AQ494W8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHRFAM7AQ494W8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHRFAM7AQ494W8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHRFAM7AQ494W8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.42■□□□□ 0.86
CHRFAM7AQ494W8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms