Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 YNL120CYNL120C 486 nt6.97□□□□□ -1.29
UBP3Q01477 YOL024WYOL024W 519 nt6.97□□□□□ -1.29
UBP3Q01477 AVO1YOL078W 3531 nt6.97□□□□□ -1.29
UBP3Q01477 snR189snR189 189 nt6.97□□□□□ -1.29
UBP3Q01477 ASN1YPR145W 1719 nt6.96□□□□□ -1.29 RIP-Chip
UBP3Q01477 PHO92YDR374C 921 nt6.96□□□□□ -1.3
UBP3Q01477 FPR2YDR519W 408 nt6.96□□□□□ -1.3
UBP3Q01477 VMA3YEL027W 483 nt6.96□□□□□ -1.3 RIP-Chip
UBP3Q01477 YGR011WYGR011W 327 nt6.96□□□□□ -1.3
UBP3Q01477 YHL044WYHL044W 708 nt6.96□□□□□ -1.3
UBP3Q01477 CTF19YPL018W 1110 nt6.96□□□□□ -1.3
UBP3Q01477 SMK1YPR054W 1167 nt6.96□□□□□ -1.3
UBP3Q01477 PEX32YBR168W 1242 nt6.96□□□□□ -1.3
UBP3Q01477 LAP2YNL045W 2016 nt6.95□□□□□ -1.3
UBP3Q01477 YDL129WYDL129W 876 nt6.95□□□□□ -1.3 RIP-Chip
UBP3Q01477 HST4YDR191W 1113 nt6.95□□□□□ -1.3
UBP3Q01477 YHR095WYHR095W 495 nt6.95□□□□□ -1.3
UBP3Q01477 FBA1YKL060C 1080 nt6.95□□□□□ -1.3
UBP3Q01477 OPI8YKR035C 642 nt6.95□□□□□ -1.3
UBP3Q01477 OGG1YML060W 1131 nt6.95□□□□□ -1.3
UBP3Q01477 RSF1YMR030W 1131 nt6.95□□□□□ -1.3
UBP3Q01477 MRPS8YMR158W 468 nt6.95□□□□□ -1.3
UBP3Q01477 YMR252CYMR252C 405 nt6.95□□□□□ -1.3
UBP3Q01477 RPC19YNL113W 429 nt6.95□□□□□ -1.3
UBP3Q01477 SCS22YBL091C-A 528 nt6.95□□□□□ -1.3
UBP3Q01477 SSP2YOR242C 1116 nt6.95□□□□□ -1.3
UBP3Q01477 OPI11YPR044C 354 nt6.95□□□□□ -1.3
UBP3Q01477 TAH18YPR048W 1872 nt6.95□□□□□ -1.3 RIP-Chip
UBP3Q01477 MST1YKL194C 1389 nt6.95□□□□□ -1.3
UBP3Q01477 HXT2YMR011W 1626 nt6.94□□□□□ -1.3
UBP3Q01477 FRE7YOL152W 1863 nt6.94□□□□□ -1.3
UBP3Q01477 UTP9YHR196W 1728 nt6.94□□□□□ -1.3
UBP3Q01477 IMG1YCR046C 510 nt6.94□□□□□ -1.3
UBP3Q01477 SKI8YGL213C 1194 nt6.94□□□□□ -1.3
UBP3Q01477 MRPL4YLR439W 960 nt6.94□□□□□ -1.3 RIP-Chip
UBP3Q01477 FAR3YMR052W 615 nt6.94□□□□□ -1.3
UBP3Q01477 YGP1YNL160W 1065 nt6.94□□□□□ -1.3
UBP3Q01477 PCL1YNL289W 840 nt6.94□□□□□ -1.3
UBP3Q01477 YNL303WYNL303W 348 nt6.94□□□□□ -1.3
UBP3Q01477 YPL250W-AYPL250W-A 288 nt6.94□□□□□ -1.3
UBP3Q01477 UGO1YDR470C 1509 nt6.94□□□□□ -1.3
UBP3Q01477 Q0255Q0255 1419 nt6.93□□□□□ -1.3
UBP3Q01477 MSY1YPL097W 1479 nt6.93□□□□□ -1.3 RIP-Chip
UBP3Q01477 FAL1YDR021W 1200 nt6.93□□□□□ -1.3
UBP3Q01477 BUD16YEL029C 939 nt6.93□□□□□ -1.3
UBP3Q01477 YER138W-AYER138W-A 105 nt6.93□□□□□ -1.3
UBP3Q01477 YBL107W-AYBL107W-A 105 nt6.93□□□□□ -1.3
UBP3Q01477 OSW1YOR255W 837 nt6.93□□□□□ -1.3
UBP3Q01477 YPL257WYPL257W 582 nt6.93□□□□□ -1.3
UBP3Q01477 ARE2YNR019W 1929 nt6.93□□□□□ -1.3 RIP-Chip
UBP3Q01477 MPC54YOR177C 1395 nt6.93□□□□□ -1.3
UBP3Q01477 THI2YBR240C 1353 nt6.93□□□□□ -1.3
UBP3Q01477 NUP1YOR098C 3231 nt6.93□□□□□ -1.3
UBP3Q01477 YKR032WYKR032W 315 nt6.92□□□□□ -1.3
UBP3Q01477 YLR361C-AYLR361C-A 297 nt6.92□□□□□ -1.3
UBP3Q01477 KSH1YNL024C-A 219 nt6.92□□□□□ -1.3
UBP3Q01477 PAF1YBR279W 1338 nt6.92□□□□□ -1.3 RIP-Chip
UBP3Q01477 QRI1YDL103C 1434 nt6.92□□□□□ -1.3
UBP3Q01477 YGR054WYGR054W 1929 nt6.91□□□□□ -1.3 RIP-Chip
UBP3Q01477 PXL1YKR090W 2121 nt6.91□□□□□ -1.3
UBP3Q01477 IMA2YOL157C 1770 nt6.91□□□□□ -1.3 RIP-Chip
UBP3Q01477 YDR187CYDR187C 519 nt6.91□□□□□ -1.3
UBP3Q01477 OPI7YDR360W 435 nt6.91□□□□□ -1.3
UBP3Q01477 HSP12YFL014W 330 nt6.91□□□□□ -1.3
UBP3Q01477 SQT1YIR012W 1296 nt6.91□□□□□ -1.3
UBP3Q01477 LYS1YIR034C 1122 nt6.91□□□□□ -1.3
UBP3Q01477 YUR1YJL139C 1287 nt6.91□□□□□ -1.3
UBP3Q01477 YMR075C-AYMR075C-A 366 nt6.91□□□□□ -1.3
UBP3Q01477 VHS1YDR247W 1386 nt6.91□□□□□ -1.3
UBP3Q01477 IPI3YNL182C 1668 nt6.9□□□□□ -1.3
UBP3Q01477 YPR204WYPR204W 3099 nt6.9□□□□□ -1.3
UBP3Q01477 PCL9YDL179W 915 nt6.9□□□□□ -1.3
UBP3Q01477 MCM21YDR318W 1107 nt6.9□□□□□ -1.3
UBP3Q01477 HAT2YEL056W 1206 nt6.9□□□□□ -1.3
UBP3Q01477 ATP12YJL180C 978 nt6.9□□□□□ -1.3
UBP3Q01477 MDH1YKL085W 1005 nt6.9□□□□□ -1.3
UBP3Q01477 APN1YKL114C 1104 nt6.9□□□□□ -1.3
UBP3Q01477 YLR285C-AYLR285C-A 171 nt6.9□□□□□ -1.3
UBP3Q01477 CTR3YLR411W 726 nt6.9□□□□□ -1.3
UBP3Q01477 RER1YCL001W 567 nt6.9□□□□□ -1.3
UBP3Q01477 NMT1YLR195C 1368 nt6.9□□□□□ -1.31
UBP3Q01477 PYK2YOR347C 1521 nt6.9□□□□□ -1.31
UBP3Q01477 YDL121CYDL121C 450 nt6.89□□□□□ -1.31
UBP3Q01477 MDE1YJR024C 735 nt6.89□□□□□ -1.31
UBP3Q01477 OAC1YKL120W 975 nt6.89□□□□□ -1.31
UBP3Q01477 YLR312CYLR312C 1197 nt6.89□□□□□ -1.31 RIP-Chip
UBP3Q01477 CSI1YMR025W 888 nt6.89□□□□□ -1.31
UBP3Q01477 NPT1YOR209C 1290 nt6.89□□□□□ -1.31
UBP3Q01477 PTC4YBR125C 1182 nt6.89□□□□□ -1.31 RIP-Chip
UBP3Q01477 PRP46YPL151C 1356 nt6.89□□□□□ -1.31 RIP-Chip
UBP3Q01477 ECM38YLR299W 1983 nt6.88□□□□□ -1.31
UBP3Q01477 ARO9YHR137W 1542 nt6.88□□□□□ -1.31
UBP3Q01477 MGR3YMR115W 1506 nt6.88□□□□□ -1.31
UBP3Q01477 IRC7YFR055W 1023 nt6.88□□□□□ -1.31
UBP3Q01477 Q0142Q0142 177 nt6.88□□□□□ -1.31
UBP3Q01477 GTO3YMR251W 1101 nt6.88□□□□□ -1.31
UBP3Q01477 BAG7YOR134W 1230 nt6.88□□□□□ -1.31
UBP3Q01477 BTS1YPL069C 1008 nt6.88□□□□□ -1.31
UBP3Q01477 DAP1YPL170W 459 nt6.88□□□□□ -1.31
UBP3Q01477 SUT2YPR009W 807 nt6.88□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 14 ms