Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX2-1P43699 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-1P43699 AL162393.1-201ENST00000437852 946 ntBASIC19.32■□□□□ 0.68
NKX2-1P43699 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-1P43699 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NKX2-1P43699 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-1P43699 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-1P43699 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-1P43699 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-1P43699 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-1P43699 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NKX2-1P43699 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.31■□□□□ 0.68
NKX2-1P43699 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-1P43699 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-1P43699 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-1P43699 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.3■□□□□ 0.68
NKX2-1P43699 AC087741.3-201ENST00000624270 1347 ntBASIC19.3■□□□□ 0.68
NKX2-1P43699 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-1P43699 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-1P43699 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.3■□□□□ 0.68
NKX2-1P43699 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
NKX2-1P43699 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-1P43699 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-1P43699 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-1P43699 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-1P43699 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-1P43699 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-1P43699 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.29■□□□□ 0.68
NKX2-1P43699 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-1P43699 DUSP8P5-201ENST00000422884 1815 ntBASIC19.29■□□□□ 0.68
NKX2-1P43699 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-1P43699 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-1P43699 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NKX2-1P43699 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-1P43699 AC079834.2-201ENST00000609776 1949 ntBASIC19.28■□□□□ 0.68
NKX2-1P43699 AC044849.2-201ENST00000606596 710 ntBASIC19.28■□□□□ 0.68
NKX2-1P43699 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-1P43699 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-1P43699 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-1P43699 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-1P43699 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.28■□□□□ 0.68
NKX2-1P43699 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-1P43699 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NKX2-1P43699 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-1P43699 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-1P43699 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-1P43699 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NKX2-1P43699 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NKX2-1P43699 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.27■□□□□ 0.68
NKX2-1P43699 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.26■□□□□ 0.67
NKX2-1P43699 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NKX2-1P43699 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-1P43699 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.26■□□□□ 0.67
NKX2-1P43699 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-1P43699 AL359504.2-201ENST00000605506 1601 ntBASIC19.25■□□□□ 0.67
NKX2-1P43699 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
NKX2-1P43699 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-1P43699 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NKX2-1P43699 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-1P43699 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-1P43699 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NKX2-1P43699 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.24■□□□□ 0.67
NKX2-1P43699 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-1P43699 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-1P43699 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NKX2-1P43699 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-1P43699 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-1P43699 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-1P43699 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-1P43699 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NKX2-1P43699 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NKX2-1P43699 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
NKX2-1P43699 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-1P43699 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
NKX2-1P43699 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-1P43699 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-1P43699 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NKX2-1P43699 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.22■□□□□ 0.67
NKX2-1P43699 AC021231.2-201ENST00000594613 730 ntBASIC19.22■□□□□ 0.67
NKX2-1P43699 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-1P43699 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NKX2-1P43699 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.21■□□□□ 0.67
NKX2-1P43699 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-1P43699 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NKX2-1P43699 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-1P43699 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NKX2-1P43699 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms