Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 NHP6BYBR089C-A 300 nt7.1□□□□□ -1.27
RTR1P40084 YFL042CYFL042C 2025 nt7.1□□□□□ -1.27
RTR1P40084 YBR230W-AYBR230W-A 201 nt7.09□□□□□ -1.27
RTR1P40084 SMC5YOL034W 3282 nt7.09□□□□□ -1.27
RTR1P40084 RHB1YCR027C 630 nt7.08□□□□□ -1.28
RTR1P40084 STL1YDR536W 1710 nt7.07□□□□□ -1.28
RTR1P40084 RSC30YHR056C 2652 nt7.07□□□□□ -1.28
RTR1P40084 CMK2YOL016C 1344 nt7.07□□□□□ -1.28
RTR1P40084 DAL7YIR031C 1665 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)CtN(GUU)C 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)FtN(GUU)F 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)GtN(GUU)G 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)KtN(GUU)K 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)LtN(GUU)L 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)N1tN(GUU)N1 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)N2tN(GUU)N2 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)O1tN(GUU)O1 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)O2tN(GUU)O2 74 nt7.07□□□□□ -1.28
RTR1P40084 tN(GUU)PtN(GUU)P 74 nt7.07□□□□□ -1.28
RTR1P40084 YOL131WYOL131W 327 nt7.07□□□□□ -1.28
RTR1P40084 RGD1YBR260C 2001 nt7.06□□□□□ -1.28
RTR1P40084 HSX1tR(CCU)J 72 nt7.06□□□□□ -1.28
RTR1P40084 SHE10YGL228W 1734 nt7.05□□□□□ -1.28
RTR1P40084 COX26YDR119W-A 201 nt7.05□□□□□ -1.28
RTR1P40084 PGA3YML125C 939 nt7.05□□□□□ -1.28
RTR1P40084 GYP1YOR070C 1914 nt7.05□□□□□ -1.28
RTR1P40084 TRK2YKR050W 2670 nt7.04□□□□□ -1.28
RTR1P40084 YDL034WYDL034W 345 nt7.04□□□□□ -1.28
RTR1P40084 IDP1YDL066W 1287 nt7.04□□□□□ -1.28
RTR1P40084 RPS15YOL040C 429 nt7.04□□□□□ -1.28
RTR1P40084 ARG1YOL058W 1263 nt7.04□□□□□ -1.28
RTR1P40084 PIN2YOR104W 849 nt7.04□□□□□ -1.28
RTR1P40084 VMA2YBR127C 1554 nt7.03□□□□□ -1.28
RTR1P40084 BRL1YHR036W 1416 nt7.03□□□□□ -1.28
RTR1P40084 YCR097W-AYCR097W-A 267 nt7.03□□□□□ -1.28
RTR1P40084 HMS2YJR147W 1077 nt7.03□□□□□ -1.28
RTR1P40084 COS9YKL219W 1224 nt7.03□□□□□ -1.28
RTR1P40084 KEX2YNL238W 2445 nt7.03□□□□□ -1.28
RTR1P40084 GIR2YDR152W 798 nt7.02□□□□□ -1.29
RTR1P40084 DAL82YNL314W 768 nt7.02□□□□□ -1.29
RTR1P40084 CLB2YPR119W 1476 nt7.02□□□□□ -1.29
RTR1P40084 UGO1YDR470C 1509 nt7.01□□□□□ -1.29
RTR1P40084 CAD1YDR423C 1230 nt7.01□□□□□ -1.29
RTR1P40084 YGR176WYGR176W 348 nt7.01□□□□□ -1.29
RTR1P40084 YLR194CYLR194C 765 nt7.01□□□□□ -1.29
RTR1P40084 CSC1YLR241W 2349 nt7.01□□□□□ -1.29
RTR1P40084 YAP1801YHR161C 1914 nt7.01□□□□□ -1.29
RTR1P40084 HSF1YGL073W 2502 nt7□□□□□ -1.29
RTR1P40084 HEL1YKR017C 1656 nt7□□□□□ -1.29
RTR1P40084 ELA1YNL230C 1140 nt7□□□□□ -1.29
RTR1P40084 YLR317WYLR317W 435 nt6.99□□□□□ -1.29
RTR1P40084 YNR048WYNR048W 1182 nt6.99□□□□□ -1.29
RTR1P40084 SSK22YCR073C 3996 nt6.98□□□□□ -1.29
RTR1P40084 CHO1YER026C 831 nt6.98□□□□□ -1.29
RTR1P40084 TFS1YLR178C 660 nt6.98□□□□□ -1.29
RTR1P40084 YEN1YER041W 2280 nt6.98□□□□□ -1.29
RTR1P40084 KEL1YHR158C 3495 nt6.97□□□□□ -1.29
RTR1P40084 RTT106YNL206C 1368 nt6.97□□□□□ -1.29
RTR1P40084 SYN8YAL014C 768 nt6.97□□□□□ -1.29
RTR1P40084 YLL059CYLL059C 507 nt6.97□□□□□ -1.29
RTR1P40084 YOL097W-AYOL097W-A 186 nt6.97□□□□□ -1.29
RTR1P40084 UTP7YER082C 1665 nt6.96□□□□□ -1.29
RTR1P40084 SSK1YLR006C 2139 nt6.96□□□□□ -1.3
RTR1P40084 TEF1YPR080W 1377 nt6.95□□□□□ -1.3
RTR1P40084 TEF2YBR118W 1377 nt6.95□□□□□ -1.3
RTR1P40084 RPT1YKL145W 1404 nt6.95□□□□□ -1.3
RTR1P40084 YJR115WYJR115W 510 nt6.95□□□□□ -1.3
RTR1P40084 PFA3YNL326C 1011 nt6.95□□□□□ -1.3
RTR1P40084 HAL5YJL165C 2568 nt6.95□□□□□ -1.3
RTR1P40084 ENT2YLR206W 1842 nt6.94□□□□□ -1.3
RTR1P40084 BAP2YBR068C 1830 nt6.94□□□□□ -1.3
RTR1P40084 ACF2YLR144C 2340 nt6.94□□□□□ -1.3
RTR1P40084 NUD1YOR373W 2556 nt6.94□□□□□ -1.3
RTR1P40084 ARP2YDL029W 1176 nt6.94□□□□□ -1.3
RTR1P40084 PGU1YJR153W 1086 nt6.94□□□□□ -1.3
RTR1P40084 NOG2YNR053C 1461 nt6.93□□□□□ -1.3
RTR1P40084 MRPL13YKR006C 795 nt6.93□□□□□ -1.3
RTR1P40084 ESC8YOL017W 2145 nt6.93□□□□□ -1.3
RTR1P40084 PIF1YML061C 2580 nt6.93□□□□□ -1.3
RTR1P40084 YHR045WYHR045W 1683 nt6.92□□□□□ -1.3
RTR1P40084 SFC1YJR095W 969 nt6.91□□□□□ -1.3
RTR1P40084 ALT1YLR089C 1779 nt6.9□□□□□ -1.3
RTR1P40084 UBC4YBR082C 447 nt6.9□□□□□ -1.3
RTR1P40084 YPR195CYPR195C 330 nt6.9□□□□□ -1.3
RTR1P40084 GPT2YKR067W 2232 nt6.9□□□□□ -1.3
RTR1P40084 IPI1YHR085W 1005 nt6.89□□□□□ -1.31
RTR1P40084 TPK1YJL164C 1194 nt6.89□□□□□ -1.31
RTR1P40084 YIL055CYIL055C 1884 nt6.89□□□□□ -1.31
RTR1P40084 DED81YHR019C 1665 nt6.88□□□□□ -1.31
RTR1P40084 GEP3YOR205C 1671 nt6.88□□□□□ -1.31
RTR1P40084 TIM54YJL054W 1437 nt6.88□□□□□ -1.31
RTR1P40084 MTQ2YDR140W 666 nt6.88□□□□□ -1.31
RTR1P40084 GON7YJL184W 372 nt6.88□□□□□ -1.31
RTR1P40084 MTQ1YNL063W 945 nt6.88□□□□□ -1.31
RTR1P40084 GEX1YCL073C 1848 nt6.87□□□□□ -1.31
RTR1P40084 GEX2YKR106W 1848 nt6.87□□□□□ -1.31
RTR1P40084 ASN2YGR124W 1719 nt6.87□□□□□ -1.31
RTR1P40084 YOS9YDR057W 1629 nt6.87□□□□□ -1.31
RTR1P40084 YLR118CYLR118C 684 nt6.87□□□□□ -1.31
RTR1P40084 PSH1YOL054W 1221 nt6.87□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 23.1 ms