Protein–RNA interactions for Protein: P34223

SHP1, UBX domain-containing protein 1, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHP1P34223 SWP1YMR149W 861 nt6.27□□□□□ -1.41
SHP1P34223 SSO1YPL232W 873 nt6.27□□□□□ -1.41
SHP1P34223 YMR155WYMR155W 1644 nt6.27□□□□□ -1.41
SHP1P34223 CLN1YMR199W 1641 nt6.27□□□□□ -1.41
SHP1P34223 PFK2YMR205C 2880 nt6.27□□□□□ -1.41
SHP1P34223 DAL4YIR028W 1908 nt6.27□□□□□ -1.41
SHP1P34223 DAL7YIR031C 1665 nt6.26□□□□□ -1.41
SHP1P34223 PGK1YCR012W 1251 nt6.26□□□□□ -1.41
SHP1P34223 YGL194C-AYGL194C-A 243 nt6.26□□□□□ -1.41
SHP1P34223 RME1YGR044C 903 nt6.26□□□□□ -1.41
SHP1P34223 HSX1tR(CCU)J 72 nt6.26□□□□□ -1.41
SHP1P34223 YBR124WYBR124W 360 nt6.26□□□□□ -1.41
SHP1P34223 YCR097W-AYCR097W-A 267 nt6.25□□□□□ -1.41
SHP1P34223 HAP2YGL237C 798 nt6.25□□□□□ -1.41
SHP1P34223 SUP2tY(GUA)D 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP11tY(GUA)F1 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP6tY(GUA)F2 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP7tY(GUA)J1 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP4tY(GUA)J2 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP5tY(GUA)M1 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP8tY(GUA)M2 75 nt6.25□□□□□ -1.41
SHP1P34223 SUP3tY(GUA)O 75 nt6.25□□□□□ -1.41
SHP1P34223 NPA3YJR072C 1158 nt6.25□□□□□ -1.41
SHP1P34223 PGU1YJR153W 1086 nt6.25□□□□□ -1.41
SHP1P34223 YLR118CYLR118C 684 nt6.25□□□□□ -1.41
SHP1P34223 RTT106YNL206C 1368 nt6.25□□□□□ -1.41
SHP1P34223 NOG2YNR053C 1461 nt6.25□□□□□ -1.41
SHP1P34223 EEB1YPL095C 1371 nt6.24□□□□□ -1.41
SHP1P34223 SHO1YER118C 1104 nt6.24□□□□□ -1.41
SHP1P34223 YJR115WYJR115W 510 nt6.24□□□□□ -1.41
SHP1P34223 HSP26YBR072W 645 nt6.24□□□□□ -1.41
SHP1P34223 YOL036WYOL036W 2286 nt6.24□□□□□ -1.41
SHP1P34223 TIM54YJL054W 1437 nt6.24□□□□□ -1.41
SHP1P34223 YUR1YJL139C 1287 nt6.23□□□□□ -1.41
SHP1P34223 YLR283WYLR283W 945 nt6.23□□□□□ -1.41
SHP1P34223 YHL017WYHL017W 1599 nt6.23□□□□□ -1.41
SHP1P34223 MNN5YJL186W 1761 nt6.22□□□□□ -1.41
SHP1P34223 COX26YDR119W-A 201 nt6.22□□□□□ -1.41
SHP1P34223 TOM20YGR082W 552 nt6.22□□□□□ -1.41
SHP1P34223 COS9YKL219W 1224 nt6.22□□□□□ -1.41
SHP1P34223 STM1YLR150W 822 nt6.22□□□□□ -1.41
SHP1P34223 IFA38YBR159W 1044 nt6.22□□□□□ -1.41
SHP1P34223 YBR226CYBR226C 411 nt6.22□□□□□ -1.41
SHP1P34223 RSP5YER125W 2430 nt6.21□□□□□ -1.41
SHP1P34223 YPK2YMR104C 2034 nt6.21□□□□□ -1.41
SHP1P34223 NOB1YOR056C 1380 nt6.21□□□□□ -1.41
SHP1P34223 GAA1YLR088W 1845 nt6.21□□□□□ -1.42
SHP1P34223 YDL034WYDL034W 345 nt6.21□□□□□ -1.42
SHP1P34223 CAD1YDR423C 1230 nt6.21□□□□□ -1.42
SHP1P34223 YER010CYER010C 705 nt6.21□□□□□ -1.42
SHP1P34223 SFC1YJR095W 969 nt6.21□□□□□ -1.42
SHP1P34223 TFS1YLR178C 660 nt6.21□□□□□ -1.42
SHP1P34223 YOL163WYOL163W 510 nt6.21□□□□□ -1.42
SHP1P34223 DIA3YDL024C 1407 nt6.21□□□□□ -1.42
SHP1P34223 XBP1YIL101C 1944 nt6.21□□□□□ -1.42
SHP1P34223 RPT6YGL048C 1218 nt6.2□□□□□ -1.42
SHP1P34223 YGR182CYGR182C 354 nt6.2□□□□□ -1.42
SHP1P34223 YKL151CYKL151C 1014 nt6.2□□□□□ -1.42
SHP1P34223 YLR122CYLR122C 378 nt6.2□□□□□ -1.42
SHP1P34223 YNL067W-AYNL067W-A 147 nt6.2□□□□□ -1.42
SHP1P34223 YOL097W-AYOL097W-A 186 nt6.2□□□□□ -1.42
SHP1P34223 HAL5YJL165C 2568 nt6.19□□□□□ -1.42
SHP1P34223 ERC1YHR032W 1746 nt6.19□□□□□ -1.42
SHP1P34223 YEN1YER041W 2280 nt6.19□□□□□ -1.42
SHP1P34223 CDC16YKL022C 2523 nt6.19□□□□□ -1.42
SHP1P34223 ICS3YJL077C 396 nt6.19□□□□□ -1.42
SHP1P34223 EFM3YJR129C 1020 nt6.19□□□□□ -1.42
SHP1P34223 ICT1YLR099C 1185 nt6.19□□□□□ -1.42
SHP1P34223 PIN2YOR104W 849 nt6.19□□□□□ -1.42
SHP1P34223 PYC1YGL062W 3537 nt6.18□□□□□ -1.42
SHP1P34223 NPL6YMR091C 1308 nt6.18□□□□□ -1.42
SHP1P34223 YJR015WYJR015W 1533 nt6.17□□□□□ -1.42
SHP1P34223 RPS2YGL123W 765 nt6.17□□□□□ -1.42
SHP1P34223 RRP46YGR095C 672 nt6.17□□□□□ -1.42
SHP1P34223 ERP2YAL007C 648 nt6.17□□□□□ -1.42
SHP1P34223 YAL056C-AYAL056C-A 351 nt6.17□□□□□ -1.42
SHP1P34223 SCO2YBR024W 906 nt6.17□□□□□ -1.42
SHP1P34223 YOR318CYOR318C 306 nt6.17□□□□□ -1.42
SHP1P34223 PRP24YMR268C 1335 nt6.17□□□□□ -1.42
SHP1P34223 BUL1YMR275C 2931 nt6.16□□□□□ -1.42
SHP1P34223 PRO3YER023W 861 nt6.16□□□□□ -1.42
SHP1P34223 SLO1YER180C-A 258 nt6.16□□□□□ -1.42
SHP1P34223 KSS1YGR040W 1107 nt6.16□□□□□ -1.42
SHP1P34223 BUD9YGR041W 1644 nt6.16□□□□□ -1.42
SHP1P34223 SHE10YGL228W 1734 nt6.16□□□□□ -1.42
SHP1P34223 PHO3YBR092C 1404 nt6.16□□□□□ -1.42
SHP1P34223 ELP3YPL086C 1674 nt6.15□□□□□ -1.42
SHP1P34223 IPI1YHR085W 1005 nt6.15□□□□□ -1.42
SHP1P34223 HCR1YLR192C 798 nt6.15□□□□□ -1.42
SHP1P34223 ARA2YMR041C 1008 nt6.15□□□□□ -1.42
SHP1P34223 YNL019CYNL019C 855 nt6.15□□□□□ -1.42
SHP1P34223 YNL033WYNL033W 855 nt6.15□□□□□ -1.42
SHP1P34223 MLC2YPR188C 492 nt6.15□□□□□ -1.42
SHP1P34223 NUD1YOR373W 2556 nt6.15□□□□□ -1.42
SHP1P34223 YME1YPR024W 2244 nt6.15□□□□□ -1.43
SHP1P34223 GPI11YDR302W 660 nt6.14□□□□□ -1.43
SHP1P34223 FPR2YDR519W 408 nt6.14□□□□□ -1.43
SHP1P34223 TAL1YLR354C 1008 nt6.14□□□□□ -1.43
SHP1P34223 PZF1YPR186C 1290 nt6.14□□□□□ -1.43
SHP1P34223 MMP1YLL061W 1752 nt6.13□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms