Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKS2P33552 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKS2P33552 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKS2P33552 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CKS2P33552 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CKS2P33552 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKS2P33552 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.38■□□□□ 0.37
CKS2P33552 AC005559.1-201ENST00000589661 871 ntBASIC17.38■□□□□ 0.37
CKS2P33552 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKS2P33552 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKS2P33552 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKS2P33552 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.38■□□□□ 0.37
CKS2P33552 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.38■□□□□ 0.37
CKS2P33552 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CKS2P33552 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CKS2P33552 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CKS2P33552 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CKS2P33552 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CKS2P33552 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CKS2P33552 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.37■□□□□ 0.37
CKS2P33552 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CKS2P33552 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CKS2P33552 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CKS2P33552 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CKS2P33552 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CKS2P33552 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC17.36■□□□□ 0.37
CKS2P33552 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CKS2P33552 DUSP8P5-201ENST00000422884 1815 ntBASIC17.35■□□□□ 0.37
CKS2P33552 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKS2P33552 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKS2P33552 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.35■□□□□ 0.37
CKS2P33552 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CKS2P33552 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKS2P33552 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKS2P33552 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKS2P33552 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKS2P33552 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CKS2P33552 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.34■□□□□ 0.37
CKS2P33552 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CKS2P33552 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKS2P33552 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CKS2P33552 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.33■□□□□ 0.36
CKS2P33552 AC097358.2-201ENST00000607541 1159 ntBASIC17.33■□□□□ 0.36
CKS2P33552 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKS2P33552 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKS2P33552 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CKS2P33552 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CKS2P33552 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKS2P33552 AC141586.4-201ENST00000624558 1573 ntBASIC17.32■□□□□ 0.36
CKS2P33552 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.32■□□□□ 0.36
CKS2P33552 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKS2P33552 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKS2P33552 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKS2P33552 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CKS2P33552 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CKS2P33552 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.31■□□□□ 0.36
CKS2P33552 AC136428.2-201ENST00000563187 214 ntBASIC17.31■□□□□ 0.36
CKS2P33552 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CKS2P33552 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.31■□□□□ 0.36
CKS2P33552 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CKS2P33552 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.3■□□□□ 0.36
CKS2P33552 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CKS2P33552 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CKS2P33552 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.3■□□□□ 0.36
CKS2P33552 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CKS2P33552 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CKS2P33552 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.29■□□□□ 0.36
CKS2P33552 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.29■□□□□ 0.36
CKS2P33552 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.29■□□□□ 0.36
CKS2P33552 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CKS2P33552 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CKS2P33552 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms