Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A2P08123 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
COL1A2P08123 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A2P08123 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL1A2P08123 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A2P08123 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A2P08123 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.33■■□□□ 1.81
COL1A2P08123 KRT125P-201ENST00000546827 989 ntBASIC26.33■■□□□ 1.81
COL1A2P08123 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A2P08123 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL1A2P08123 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
COL1A2P08123 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL1A2P08123 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL1A2P08123 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
COL1A2P08123 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.32■■□□□ 1.8
COL1A2P08123 MIR4281-201ENST00000580852 62 ntBASIC26.32■■□□□ 1.8
COL1A2P08123 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.32■■□□□ 1.8
COL1A2P08123 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL1A2P08123 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL1A2P08123 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL1A2P08123 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL1A2P08123 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL1A2P08123 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A2P08123 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.3■■□□□ 1.8
COL1A2P08123 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
COL1A2P08123 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A2P08123 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.3■■□□□ 1.8
COL1A2P08123 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
COL1A2P08123 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A2P08123 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.3■■□□□ 1.8
COL1A2P08123 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.3■■□□□ 1.8
COL1A2P08123 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.3■■□□□ 1.8
COL1A2P08123 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL1A2P08123 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.3■■□□□ 1.8
COL1A2P08123 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.29■■□□□ 1.8
COL1A2P08123 AC096887.2-201ENST00000623443 1957 ntBASIC26.29■■□□□ 1.8
COL1A2P08123 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A2P08123 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A2P08123 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.29■■□□□ 1.8
COL1A2P08123 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.29■■□□□ 1.8
COL1A2P08123 MIR4787-201ENST00000607364 84 ntBASIC26.29■■□□□ 1.8
COL1A2P08123 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL1A2P08123 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
COL1A2P08123 AL121749.1-202ENST00000609313 2153 ntBASIC26.28■■□□□ 1.8
COL1A2P08123 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A2P08123 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A2P08123 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A2P08123 AL356441.2-201ENST00000443009 864 ntBASIC26.28■■□□□ 1.8
COL1A2P08123 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.28■■□□□ 1.8
COL1A2P08123 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL1A2P08123 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A2P08123 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.27■■□□□ 1.8
COL1A2P08123 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
COL1A2P08123 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.27■■□□□ 1.8
COL1A2P08123 AC021242.3-201ENST00000607598 1377 ntBASIC26.27■■□□□ 1.8
COL1A2P08123 AC010501.1-201ENST00000606270 1962 ntBASIC26.27■■□□□ 1.8
COL1A2P08123 ERN1-208ENST00000606895 2068 ntBASIC26.27■■□□□ 1.8
COL1A2P08123 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL1A2P08123 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.26■■□□□ 1.8
COL1A2P08123 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A2P08123 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.26■■□□□ 1.79
COL1A2P08123 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A2P08123 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.26■■□□□ 1.79
COL1A2P08123 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
COL1A2P08123 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.26■■□□□ 1.79
COL1A2P08123 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL1A2P08123 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
COL1A2P08123 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL1A2P08123 FOXO3B-201ENST00000395675 1928 ntBASIC26.25■■□□□ 1.79
COL1A2P08123 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A2P08123 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A2P08123 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A2P08123 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.24■■□□□ 1.79
COL1A2P08123 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
COL1A2P08123 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.24■■□□□ 1.79
COL1A2P08123 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.24■■□□□ 1.79
COL1A2P08123 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
COL1A2P08123 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.23■■□□□ 1.79
COL1A2P08123 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.23■■□□□ 1.79
COL1A2P08123 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
COL1A2P08123 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.23■■□□□ 1.79
COL1A2P08123 AC097639.1-201ENST00000565519 1891 ntBASIC26.23■■□□□ 1.79
COL1A2P08123 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.22■■□□□ 1.79
COL1A2P08123 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.22■■□□□ 1.79
COL1A2P08123 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A2P08123 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A2P08123 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
COL1A2P08123 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
COL1A2P08123 AC131212.1-201ENST00000613771 668 ntBASIC26.21■■□□□ 1.79
COL1A2P08123 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A2P08123 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A2P08123 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A2P08123 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A2P08123 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
COL1A2P08123 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms