Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.46■■■□□ 2.15
APPP05067 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.46■■■□□ 2.15
APPP05067 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
APPP05067 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.46■■■□□ 2.15
APPP05067 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC28.46■■■□□ 2.15
APPP05067 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.46■■■□□ 2.15
APPP05067 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
APPP05067 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.46■■■□□ 2.15
APPP05067 AC097639.1-201ENST00000565519 1891 ntBASIC28.46■■■□□ 2.15
APPP05067 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
APPP05067 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.46■■■□□ 2.15
APPP05067 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.15
APPP05067 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
APPP05067 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
APPP05067 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.45■■■□□ 2.14
APPP05067 RARRES2P1-201ENST00000474487 481 ntBASIC28.45■■■□□ 2.14
APPP05067 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
APPP05067 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.45■■■□□ 2.14
APPP05067 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
APPP05067 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
APPP05067 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
APPP05067 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC28.44■■■□□ 2.14
APPP05067 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.43■■■□□ 2.14
APPP05067 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
APPP05067 AC019171.1-201ENST00000601251 1056 ntBASIC28.43■■■□□ 2.14
APPP05067 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
APPP05067 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
APPP05067 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
APPP05067 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
APPP05067 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
APPP05067 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
APPP05067 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
APPP05067 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC28.42■■■□□ 2.14
APPP05067 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
APPP05067 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC28.42■■■□□ 2.14
APPP05067 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.41■■■□□ 2.14
APPP05067 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
APPP05067 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
APPP05067 YBX1P4-201ENST00000392794 808 ntBASIC28.41■■■□□ 2.14
APPP05067 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
APPP05067 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
APPP05067 AC103834.1-201ENST00000520383 144 ntBASIC28.4■■■□□ 2.14
APPP05067 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
APPP05067 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
APPP05067 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
APPP05067 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.39■■■□□ 2.14
APPP05067 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
APPP05067 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
APPP05067 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.13
APPP05067 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
APPP05067 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.38■■■□□ 2.13
APPP05067 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
APPP05067 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
APPP05067 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
APPP05067 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
APPP05067 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
APPP05067 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.37■■■□□ 2.13
APPP05067 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.37■■■□□ 2.13
APPP05067 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
APPP05067 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.37■■■□□ 2.13
APPP05067 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
APPP05067 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
APPP05067 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
APPP05067 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
APPP05067 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC28.36■■■□□ 2.13
APPP05067 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
APPP05067 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
APPP05067 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
APPP05067 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
APPP05067 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
APPP05067 MIR4508-201ENST00000584178 70 ntBASIC28.35■■■□□ 2.13
APPP05067 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.35■■■□□ 2.13
APPP05067 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
APPP05067 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC28.34■■■□□ 2.13
APPP05067 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
APPP05067 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
APPP05067 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.34■■■□□ 2.13
APPP05067 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
APPP05067 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
APPP05067 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.34■■■□□ 2.13
APPP05067 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
APPP05067 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.33■■■□□ 2.13
APPP05067 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
APPP05067 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.33■■■□□ 2.13
APPP05067 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
APPP05067 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.33■■■□□ 2.13
APPP05067 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APPP05067 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
APPP05067 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
APPP05067 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
APPP05067 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
APPP05067 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
APPP05067 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
APPP05067 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
APPP05067 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
APPP05067 FOXO3B-201ENST00000395675 1928 ntBASIC28.3■■■□□ 2.12
APPP05067 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.29■■■□□ 2.12
APPP05067 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
APPP05067 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
APPP05067 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms